Variant report

Variant	rs6931876
Chromosome Location	chr6:13884615-13884616
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs1204188	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1204193	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1204194	1.00[EUR][1000 genomes]
rs1204216	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1204236	0.82[AFR][1000 genomes]
rs1204244	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6924039	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs750706	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3420238	chr6:13880473-13885771	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:13882600-13885000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr6:13884000-13886000	Enhancers	Fetal Brain Male	brain
3	chr6:13884200-13885200	Enhancers	K562	blood
4	chr6:13884600-13885000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr6:13884600-13885200	Enhancers	Gastric	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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