The 2.0 version of rSNPBase

Variant report

Variant rs6938896
Chromosome Location chr6:4855271-4855272
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:4844600-4859600 Weak transcription Spleen Spleen
2 chr6:4844800-4856600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr6:4844800-4863000 Weak transcription Primary B cells from peripheral blood blood
4 chr6:4846400-4859000 Weak transcription Primary hematopoietic stem cells blood
5 chr6:4847400-4871000 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr6:4849000-4856000 Weak transcription H9 Cell Line embryonic stem cell
7 chr6:4849000-4856000 Weak transcription Brain Angular Gyrus brain
8 chr6:4849000-4856600 Weak transcription Right Ventricle heart
9 chr6:4849000-4857800 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr6:4849000-4859000 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr6:4849000-4863000 Weak transcription Fetal Muscle Leg muscle
12 chr6:4849200-4857800 Weak transcription Pancreas Pancrea
13 chr6:4849200-4858200 Weak transcription Fetal Muscle Trunk muscle
14 chr6:4849200-4858600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr6:4849200-4858600 Weak transcription Brain Substantia Nigra brain
16 chr6:4849200-4859000 Weak transcription Brain Anterior Caudate brain
17 chr6:4849200-4859400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr6:4849200-4861400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr6:4849200-4863200 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr6:4849200-4865400 Weak transcription Aorta Aorta
21 chr6:4849400-4862400 Weak transcription Fetal Kidney kidney
22 chr6:4849600-4861400 Weak transcription Placenta Placenta
23 chr6:4849800-4856000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr6:4849800-4858200 Weak transcription Colon Smooth Muscle Colon
25 chr6:4849800-4858400 Weak transcription Small Intestine intestine
26 chr6:4849800-4863800 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr6:4849800-4868000 Weak transcription Hela-S3 cervix
28 chr6:4850600-4857400 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr6:4850800-4858600 Weak transcription Stomach Smooth Muscle stomach
30 chr6:4852400-4856400 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr6:4853200-4858000 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr6:4853400-4856400 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr6:4853400-4858200 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr6:4853400-4858600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr6:4854000-4870400 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr6:4854200-4857600 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr6:4854200-4858000 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr6:4854200-4858600 Weak transcription Primary monocytes fromperipheralblood blood
39 chr6:4854200-4859000 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr6:4854200-4859600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr6:4854400-4855800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr6:4854400-4856000 Weak transcription Left Ventricle heart
43 chr6:4854400-4856600 Weak transcription GM12878-XiMat blood
44 chr6:4854400-4858600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr6:4854400-4858600 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr6:4854400-4858600 Weak transcription NHEK skin
47 chr6:4854400-4861400 Weak transcription Primary T cells fromperipheralblood blood
48 chr6:4854400-4861600 Weak transcription Fetal Thymus thymus
49 chr6:4854400-4861800 Weak transcription Duodenum Mucosa Duodenum
50 chr6:4854400-4870800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015