The 2.0 version of rSNPBase

Variant report

Variant rs808604
Chromosome Location chr6:4862981-4862982
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:4844800-4863000 Weak transcription Primary B cells from peripheral blood blood
2 chr6:4847400-4871000 Weak transcription iPS-20b Cell Line embryonic stem cell
3 chr6:4849000-4863000 Weak transcription Fetal Muscle Leg muscle
4 chr6:4849200-4863200 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr6:4849200-4865400 Weak transcription Aorta Aorta
6 chr6:4849800-4863800 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr6:4849800-4868000 Weak transcription Hela-S3 cervix
8 chr6:4854000-4870400 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr6:4854400-4870800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr6:4854600-4863200 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr6:4854600-4871200 Weak transcription NH-A brain
12 chr6:4854800-4863200 Weak transcription Primary T cells from cord blood blood
13 chr6:4855200-4882200 Weak transcription Fetal Stomach stomach
14 chr6:4856800-4865400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr6:4856800-4883600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr6:4858800-4880400 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr6:4859000-4876600 Weak transcription Ovary ovary
18 chr6:4859200-4867800 Weak transcription A549 lung
19 chr6:4859400-4863000 Weak transcription Primary hematopoietic stem cells blood
20 chr6:4859600-4864400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr6:4859600-4870200 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr6:4859600-4870800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr6:4859600-4871200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr6:4859800-4865400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr6:4859800-4870800 Weak transcription NHEK skin
26 chr6:4859800-4871000 Weak transcription HMEC breast
27 chr6:4859800-4871200 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr6:4860000-4863400 Weak transcription H1 Cell Line embryonic stem cell
29 chr6:4860200-4870800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr6:4861400-4863000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr6:4861600-4863400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr6:4861800-4863000 Enhancers Skeletal Muscle Female skeletal muscle
33 chr6:4861800-4871400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr6:4861800-4872000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr6:4862000-4863000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr6:4862200-4863600 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr6:4862200-4864000 Weak transcription K562 blood
38 chr6:4862200-4871400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr6:4862400-4863200 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr6:4862400-4872000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr6:4862600-4864200 Weak transcription Placenta Placenta
42 chr6:4862600-4865400 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr6:4862800-4863200 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015