Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:136161783..136165029-chr7:136166153..136169309,4	K562	blood:

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10215057	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10215760	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10242964	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10249296	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10259832	0.92[EUR][1000 genomes]
rs1364743	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1425155	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1425163	0.84[AMR][1000 genomes]
rs1425164	0.84[AMR][1000 genomes]
rs1425165	0.84[AMR][1000 genomes]
rs1425166	0.84[AMR][1000 genomes]
rs1593317	0.84[AMR][1000 genomes]
rs1946328	1.00[CEU][hapmap];1.00[TSI][hapmap];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2349741	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2349743	1.00[EUR][1000 genomes]
rs2350167	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4584099	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4732215	0.85[EUR][1000 genomes]
rs4732216	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4732217	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6467665	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6946561	1.00[CEU][hapmap]
rs6966702	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7796090	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9642050	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9642054	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs980193	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs980194	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv518439	chr7:136134265-136452082	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs6945197	SERPINA1	trans	lymphoblastoid	seeQTL

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:136161400-136163400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr7:136161600-136162200	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr7:136161600-136162200	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr7:136161600-136163000	Enhancers	HUES64 Cell Line	embryonic stem cell

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