Variant report

Variant	rs6960069
Chromosome Location	chr7:147191283-147191284
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:147190883..147193448-chr7:147193743..147195946,2	K562	blood:
2	chr7:147189869..147191516-chr7:147192793..147195563,2	MCF-7	breast:

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10276658	1.00[CHB][hapmap]
rs10500185	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10500187	0.81[EUR][1000 genomes]
rs11764538	1.00[ASN][1000 genomes]
rs11770339	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11771144	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11773683	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12703921	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13222223	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs13223092	1.00[ASN][1000 genomes]
rs13231991	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs13233234	1.00[ASN][1000 genomes]
rs13235407	1.00[CHB][hapmap]
rs13235593	1.00[ASN][1000 genomes]
rs13241063	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs13242678	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs13243643	0.86[AFR][1000 genomes]
rs13246604	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs13247132	1.00[ASN][1000 genomes]
rs1406288	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1528520	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1842273	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1842274	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1871492	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2373031	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs34163397	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs34959888	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs34993596	1.00[ASN][1000 genomes]
rs35288063	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs35696201	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs35756055	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35894873	1.00[ASN][1000 genomes]
rs35894927	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36103173	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6957443	1.00[AFR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7781464	1.00[ASN][1000 genomes]
rs997223	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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