Variant report

Variant	rs6968786
Chromosome Location	chr7:121942847-121942848
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11761299	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.92[YRI][hapmap];0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11762051	0.86[CHB][hapmap]
rs11767283	0.86[CHB][hapmap]
rs11978249	0.87[EUR][1000 genomes]
rs1443753	0.92[CEU][hapmap];0.86[CHB][hapmap];0.84[EUR][1000 genomes]
rs1663010	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1867335	0.96[CEU][hapmap];0.86[CHB][hapmap];0.84[EUR][1000 genomes]
rs3958045	0.88[EUR][1000 genomes]
rs5007345	0.86[CHB][hapmap]
rs538558	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6976916	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:121939600-121943000	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
2	chr7:121939800-121947600	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
3	chr7:121940000-121951000	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr7:121941200-121943400	Flanking Bivalent TSS/Enh	HUES64 Cell Line	embryonic stem cell
5	chr7:121941200-121944400	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr7:121942200-121943800	Weak transcription	Right Atrium	heart
7	chr7:121942400-121943000	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
8	chr7:121942600-121943000	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
9	chr7:121942600-121943000	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
10	chr7:121942600-121943000	Bivalent/Poised TSS	ES-UCSF4 Cell Line	embryonic stem cell
11	chr7:121942600-121944000	Bivalent/Poised TSS	Brain Germinal Matrix	brain
12	chr7:121942800-121943000	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
13	chr7:121942800-121943200	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
14	chr7:121942800-121944200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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