The 2.0 version of rSNPBase

Variant report

Variant rs696888
Chromosome Location chr5:60898157-60898158
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60893400-60898200 Enhancers Fetal Thymus thymus
2 chr5:60894200-60898600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr5:60894200-60900800 Enhancers Adipose Nuclei Adipose
4 chr5:60894400-60898600 Weak transcription Esophagus oesophagus
5 chr5:60895200-60901000 Enhancers Fetal Muscle Leg muscle
6 chr5:60895400-60898800 Enhancers Fetal Stomach stomach
7 chr5:60895400-60899000 Enhancers Stomach Mucosa stomach
8 chr5:60895400-60900000 Enhancers Fetal Lung lung
9 chr5:60895400-60900800 Enhancers Fetal Adrenal Gland Adrenal Gland
10 chr5:60895600-60898600 Weak transcription Left Ventricle heart
11 chr5:60895600-60912800 Weak transcription Gastric stomach
12 chr5:60896000-60898600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr5:60896000-60899400 Weak transcription Placenta Placenta
14 chr5:60896000-60902400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr5:60896200-60898200 Weak transcription Fetal Kidney kidney
16 chr5:60896200-60898600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr5:60896200-60899000 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr5:60896200-60899400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr5:60896200-60899400 Weak transcription Small Intestine intestine
20 chr5:60896200-60899600 Weak transcription Brain Inferior Temporal Lobe brain
21 chr5:60896200-60900600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr5:60896400-60898200 Weak transcription Right Atrium heart
23 chr5:60896400-60899200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr5:60896400-60899400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr5:60896400-60899600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr5:60896400-60899600 Weak transcription Brain Angular Gyrus brain
27 chr5:60896400-60900600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr5:60896600-60898400 Weak transcription Brain Hippocampus Middle brain
29 chr5:60896600-60899000 Weak transcription Brain Substantia Nigra brain
30 chr5:60896600-60899400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr5:60896600-60899400 Weak transcription Brain Cingulate Gyrus brain
32 chr5:60896800-60898400 Weak transcription Fetal Intestine Small intestine
33 chr5:60896800-60898800 Weak transcription Brain Anterior Caudate brain
34 chr5:60896800-60898800 Enhancers Lung lung
35 chr5:60897200-60898400 Enhancers A549 lung
36 chr5:60897200-60899000 Weak transcription Fetal Heart heart
37 chr5:60897200-60899200 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr5:60897400-60900800 Enhancers Pancreas Pancrea
39 chr5:60897600-60898400 Weak transcription Fetal Muscle Trunk muscle
40 chr5:60898000-60900200 Weak transcription Duodenum Mucosa Duodenum
41 chr5:60898000-60901000 Enhancers HSMMtube muscle

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Last update: Aug 31, 2015