Variant report

Variant	rs6982764
Chromosome Location	chr8:85276246-85276247
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs12680668	1.00[ASW][hapmap]
rs16912707	1.00[ASW][hapmap]
rs57948903	0.88[AFR][1000 genomes]
rs6473543	0.82[YRI][hapmap]
rs6983050	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs73296866	0.84[AFR][1000 genomes]
rs73304862	0.88[EUR][1000 genomes]
rs73306939	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7815538	0.88[CEU][hapmap];0.82[YRI][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831374	chr8:85103604-85308976	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv831375	chr8:85272352-85463621	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links