Variant report

Variant	rs6986157
Chromosome Location	chr8:60843932-60843933
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs10957116	0.90[ASN][1000 genomes]
rs10957117	0.90[ASN][1000 genomes]
rs11995958	1.00[EUR][1000 genomes]
rs1497033	0.98[ASN][1000 genomes]
rs1497034	0.98[ASN][1000 genomes]
rs16925424	0.98[ASN][1000 genomes]
rs16925436	0.98[ASN][1000 genomes]
rs16925438	0.92[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs16925439	0.92[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs16925446	0.92[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs16925448	0.92[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs16925476	0.96[ASN][1000 genomes]
rs16925485	0.90[ASN][1000 genomes]
rs16925486	0.90[ASN][1000 genomes]
rs16925593	1.00[EUR][1000 genomes]
rs16925595	1.00[EUR][1000 genomes]
rs16925596	1.00[EUR][1000 genomes]
rs16925605	1.00[EUR][1000 genomes]
rs2088344	1.00[EUR][1000 genomes]
rs2088345	1.00[EUR][1000 genomes]
rs60430945	0.83[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs62510039	0.92[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs62511073	0.92[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs62511074	0.92[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs62511075	0.92[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs6985296	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7002513	0.92[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs7002780	0.92[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs7003409	0.92[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs7003592	0.92[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs7007065	0.92[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7007191	0.92[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7816800	1.00[ASN][1000 genomes]
rs7823305	0.98[ASN][1000 genomes]
rs7823331	0.98[ASN][1000 genomes]
rs7827378	0.98[ASN][1000 genomes]
rs7827640	0.98[ASN][1000 genomes]
rs7827750	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7827752	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7838048	0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831331	chr8:60770382-60959633	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:60835000-60844600	Weak transcription	Rectal Smooth Muscle	rectum
2	chr8:60842800-60845000	Enhancers	Stomach Smooth Muscle	stomach
3	chr8:60843200-60846000	Enhancers	Colon Smooth Muscle	Colon
4	chr8:60843400-60844000	Weak transcription	Ovary	ovary
5	chr8:60843800-60845200	Enhancers	Fetal Stomach	stomach

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