Variant report

Variant	rs6987588
Chromosome Location	chr8:130572304-130572305
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10505545	0.81[CEU][hapmap];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6470740	1.00[CEU][hapmap];0.94[CHB][hapmap];0.95[JPT][hapmap];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7817503	0.81[CEU][hapmap];0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7843207	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9297794	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9649961	0.88[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130568600-130572600	Transcr. at gene 5' and 3'	K562	blood
2	chr8:130568800-130587000	Weak transcription	Thymus	Thymus
3	chr8:130571200-130575600	Genic enhancers	Dnd41	blood
4	chr8:130572000-130573600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr8:130572200-130575400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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