Variant report

Variant	rs699594
Chromosome Location	chr12:63356450-63356451
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs12099667	1.00[EUR][1000 genomes]
rs12308434	1.00[EUR][1000 genomes]
rs2228155	1.00[EUR][1000 genomes]
rs60154663	1.00[EUR][1000 genomes]
rs74097040	1.00[EUR][1000 genomes]
rs7960001	1.00[EUR][1000 genomes]
rs7961102	1.00[EUR][1000 genomes]
rs7969071	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3415227	chr12:63228121-63591615	Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:63353000-63357400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr12:63353400-63357000	Weak transcription	HepG2	liver
3	chr12:63356200-63357400	Weak transcription	Stomach Mucosa	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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