Variant report

Variant	rs7001527
Chromosome Location	chr8:130685722-130685723
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs16904131	1.00[AMR][1000 genomes]
rs16904132	1.00[AMR][1000 genomes]
rs16904137	1.00[AMR][1000 genomes]
rs6995255	1.00[AMR][1000 genomes]
rs6998849	1.00[AMR][1000 genomes]
rs7013707	1.00[AMR][1000 genomes]
rs7017100	1.00[AMR][1000 genomes]
rs7828399	1.00[AMR][1000 genomes]
rs7846460	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891446	chr8:130656205-130710638	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Strong transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130682600-130694000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr8:130684800-130686000	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
3	chr8:130685000-130686000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr8:130685000-130686000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr8:130685400-130688200	Enhancers	K562	blood
6	chr8:130685600-130686000	Enhancers	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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