Variant report

Variant	rs7004700
Chromosome Location	chr8:91237701-91237702
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:91179428..91181917-chr8:91237030..91238602,2	K562	blood:
2	chr8:91187662..91190502-chr8:91236582..91238750,2	K562	blood:
3	chr8:91179428..91181917-chr8:91237030..91239652,3	K562	blood:
4	chr8:91235807..91240613-chr8:91250967..91255237,5	K562	blood:
5	chr8:91027659..91030612-chr8:91236231..91238542,2	K562	blood:
6	chr8:91237101..91239532-chr8:91255640..91258349,3	K562	blood:
7	chr8:91012457..91016466-chr8:91233540..91237741,4	K562	blood:
8	chr8:91234288..91238197-chr8:91246865..91250561,3	K562	blood:
9	chr8:91012660..91015157-chr8:91235154..91237814,2	MCF-7	breast:

No data

No data

No data

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs58393960	1.00[AMR][1000 genomes]
rs60217143	1.00[AMR][1000 genomes]
rs60471107	1.00[AMR][1000 genomes]
rs73295228	1.00[AMR][1000 genomes]
rs73295248	1.00[AMR][1000 genomes]
rs73295256	1.00[AMR][1000 genomes]
rs73295280	1.00[AMR][1000 genomes]
rs73295282	1.00[AMR][1000 genomes]
rs73297267	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73297274	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758164	chr8:91000786-91329669	Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	esv2759628	chr8:91000786-91329669	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91229600-91238600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr8:91235600-91240000	Transcr. at gene 5' and 3'	K562	blood
3	chr8:91237000-91240600	Weak transcription	Hela-S3	cervix

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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