Variant report

Variant	rs73297274
Chromosome Location	chr8:91242756-91242757
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:90995721..90998156-chr8:91242084..91244807,2	K562	blood:
2	chr8:91093674..91096171-chr8:91242655..91245127,2	K562	blood:
3	chr8:91242047..91244608-chr8:91257106..91259132,2	K562	blood:
4	chr8:91094674..91097076-chr8:91241474..91243538,2	K562	blood:
5	chr8:91240676..91242950-chr8:91249101..91250668,2	MCF-7	breast:
6	chr8:91184470..91187262-chr8:91242748..91244864,2	K562	blood:
7	chr8:90995448..90997221-chr8:91241711..91243584,2	K562	blood:
8	chr8:91196894..91200069-chr8:91240130..91243292,3	K562	blood:

No data

No data

No data

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs58393960	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60217143	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60471107	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7004700	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73295228	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73295248	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73295256	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73295280	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73295282	1.00[AMR][1000 genomes]
rs73297267	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758164	chr8:91000786-91329669	Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	esv2759628	chr8:91000786-91329669	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91240200-91244200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr8:91240600-91244800	Enhancers	Hela-S3	cervix
3	chr8:91241200-91243400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr8:91241400-91243400	Weak transcription	HMEC	breast
5	chr8:91241400-91243400	Weak transcription	NHEK	skin
6	chr8:91242000-91242800	Enhancers	K562	blood
7	chr8:91242400-91244000	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr8:91242600-91244200	Enhancers	Monocytes-CD14+_RO01746	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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