Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs1440289	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17064790	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs17064798	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17685247	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17752483	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17752495	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17752600	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs17831780	0.95[ASN][1000 genomes]
rs1866722	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs5028635	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs57245404	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs60167642	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs60880349	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62501423	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs62501424	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6558614	0.82[AMR][1000 genomes]
rs6981174	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7002753	0.81[EUR][1000 genomes]
rs7015065	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7016542	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73555982	0.82[EUR][1000 genomes]
rs7464271	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7812397	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7828468	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889712	chr8:1591412-2337777	Weak transcription Active TSS Strong transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:2094000-2122400	Weak transcription	Right Ventricle	heart
2	chr8:2101000-2118000	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr8:2104600-2122200	Weak transcription	Fetal Thymus	thymus
4	chr8:2109400-2112000	Enhancers	Primary T helper cells fromperipheralblood	blood
5	chr8:2110200-2111600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
6	chr8:2110200-2111800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
7	chr8:2110200-2113600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
8	chr8:2110200-2113600	Weak transcription	Pancreas	Pancrea
9	chr8:2110200-2116600	Weak transcription	Left Ventricle	heart
10	chr8:2111200-2111600	Enhancers	Primary T cells fromperipheralblood	blood
11	chr8:2111200-2112000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
12	chr8:2111400-2113000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--

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