Variant report

Variant	rs7009288
Chromosome Location	chr8:59908155-59908156
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10097311	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17241003	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17241654	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17300113	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs60871984	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62504492	0.84[ASN][1000 genomes]
rs6985657	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7837624	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7838202	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59889800-59927000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr8:59891000-59916600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr8:59891200-59918000	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr8:59894800-59913600	Weak transcription	Small Intestine	intestine
5	chr8:59900400-59919000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr8:59902200-59924600	Weak transcription	Primary hematopoietic stem cells	blood
7	chr8:59904800-59908400	Weak transcription	Fetal Brain Male	brain
8	chr8:59904800-59918400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr8:59905800-59908800	Weak transcription	Primary T cells from cord blood	blood
10	chr8:59905800-59921000	Weak transcription	Primary T cells fromperipheralblood	blood
11	chr8:59905800-59924200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
12	chr8:59905800-59925400	Weak transcription	Primary T helper cells PMA-I stimulated	--
13	chr8:59906000-59924400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
14	chr8:59907200-59914600	Weak transcription	Fetal Thymus	thymus
15	chr8:59907400-59909200	Enhancers	Pancreatic Islets	Pancreatic Islet
16	chr8:59907600-59913600	Weak transcription	Dnd41	blood
17	chr8:59907600-59918400	Weak transcription	Thymus	Thymus

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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