Variant report

Variant	rs7032779
Chromosome Location	chr9:94372455-94372456
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1492685	0.85[CHB][hapmap]
rs1532230	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs2131303	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2131304	0.93[CEU][hapmap];0.85[CHB][hapmap]
rs7031240	0.82[CHB][hapmap];0.82[JPT][hapmap];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7040014	0.84[ASN][1000 genomes]
rs7041911	0.93[CEU][hapmap];0.85[CHB][hapmap];0.81[YRI][hapmap]
rs7852614	0.86[CEU][hapmap];0.85[CHB][hapmap]
rs7855529	0.86[CEU][hapmap];0.85[CHB][hapmap]
rs9409437	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9409447	0.85[CHB][hapmap]
rs9409619	0.85[CHB][hapmap];0.85[JPT][hapmap];0.81[YRI][hapmap];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9409620	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9409634	0.86[CEU][hapmap];0.85[CHB][hapmap]
rs9409635	0.86[CEU][hapmap];0.85[CHB][hapmap]
rs9409636	0.85[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045332	chr9:94352661-94656016	Active TSS Bivalent Enhancer Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1047426	chr9:94363211-94758114	Weak transcription Bivalent Enhancer Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
3	nsv1051194	chr9:94371037-94394234	Enhancers Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	esv275033	chr9:94371706-94373806	Enhancers Weak transcription	TF binding region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:94368800-94374000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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