Variant report

Variant	rs7054903
Chromosome Location	chrX:104589648-104589649
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1321389	0.91[YRI][hapmap]
rs1321390	0.91[YRI][hapmap]
rs1358795	0.85[YRI][hapmap]
rs1406993	0.91[YRI][hapmap]
rs16984714	0.91[YRI][hapmap]
rs16984717	0.91[YRI][hapmap]
rs16984733	0.91[YRI][hapmap]
rs17003893	0.91[YRI][hapmap]
rs2021938	0.91[YRI][hapmap]
rs2392752	0.95[YRI][hapmap]
rs6523838	0.91[YRI][hapmap]
rs6523841	0.91[YRI][hapmap]
rs6621963	0.95[YRI][hapmap]
rs6652921	0.91[YRI][hapmap]
rs7052978	0.91[YRI][hapmap]
rs7053099	0.91[YRI][hapmap]
rs7059947	0.87[YRI][hapmap]
rs7063939	0.91[YRI][hapmap]
rs7067174	0.95[YRI][hapmap]
rs7885408	0.95[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432352	chrX:104346855-104831855	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links