Variant report

Variant	rs706413
Chromosome Location	chr1:56602992-56602993
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10888957	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11206730	0.83[AMR][1000 genomes]
rs11206737	0.88[AMR][1000 genomes]
rs1229947	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12407856	0.87[ASN][1000 genomes]
rs34846893	0.87[ASN][1000 genomes]
rs6588608	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6657024	0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6680237	0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6697082	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7514852	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs946197	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56598600-56603800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr1:56600000-56603200	Weak transcription	NHLF	lung
3	chr1:56600600-56604400	Enhancers	Hela-S3	cervix
4	chr1:56600600-56604800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr1:56601200-56604600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr1:56601600-56603000	Enhancers	Fetal Muscle Leg	muscle
7	chr1:56601800-56610400	Weak transcription	Aorta	Aorta
8	chr1:56602000-56603200	Enhancers	Fetal Heart	heart
9	chr1:56602200-56604000	Weak transcription	NHDF-Ad	bronchial
10	chr1:56602600-56603200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr1:56602600-56603600	Enhancers	Muscle Satellite Cultured Cells	--
12	chr1:56602600-56603800	Enhancers	HSMMtube	muscle
13	chr1:56602600-56604000	Enhancers	Placenta Amnion	Placenta Amnion
14	chr1:56602600-56604200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr1:56602800-56603000	Enhancers	Psoas Muscle	Psoas
16	chr1:56602800-56603200	Enhancers	Skeletal Muscle Male	skeletal muscle
17	chr1:56602800-56604400	Enhancers	HUVEC	blood vessel
18	chr1:56602800-56604400	Enhancers	Osteobl	bone
19	chr1:56602800-56605400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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