Variant report

Variant	rs7093331
Chromosome Location	chr10:98177245-98177246
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:98164877..98167127-chr10:98174978..98177605,2	K562	blood:
2	chr10:98175305..98178376-chr10:98181007..98184724,4	K562	blood:

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1937091	1.00[EUR][1000 genomes]
rs2154204	1.00[EUR][1000 genomes]
rs2186070	1.00[EUR][1000 genomes]
rs2290713	1.00[EUR][1000 genomes]
rs2901994	1.00[EUR][1000 genomes]
rs4919017	1.00[EUR][1000 genomes]
rs6584072	1.00[EUR][1000 genomes]
rs7081009	1.00[EUR][1000 genomes]
rs72637510	1.00[EUR][1000 genomes]
rs74151348	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3413353	chr10:98039370-98561524	Enhancers Genic enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
2	nsv831950	chr10:98080972-98245434	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv1047657	chr10:98123234-98183487	Weak transcription Active TSS Genic enhancers Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:98171600-98182200	Weak transcription	Spleen	Spleen
2	chr10:98174400-98182000	Weak transcription	Right Ventricle	heart
3	chr10:98174800-98180200	Weak transcription	Left Ventricle	heart
4	chr10:98175000-98178200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr10:98175400-98179400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr10:98175600-98177400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr10:98175600-98177400	Enhancers	Adipose Nuclei	Adipose
8	chr10:98175600-98177400	Enhancers	Brain Cingulate Gyrus	brain
9	chr10:98175600-98177400	Enhancers	HepG2	liver
10	chr10:98175600-98177600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr10:98175600-98177600	Enhancers	Brain Angular Gyrus	brain
12	chr10:98175600-98177600	Enhancers	Brain Inferior Temporal Lobe	brain
13	chr10:98175600-98177600	Enhancers	Brain Substantia Nigra	brain
14	chr10:98175800-98177800	Enhancers	Placenta	Placenta
15	chr10:98176000-98177400	Enhancers	Brain Anterior Caudate	brain
16	chr10:98176000-98177400	Enhancers	Fetal Muscle Trunk	muscle
17	chr10:98176000-98177400	Enhancers	Fetal Muscle Leg	muscle
18	chr10:98176000-98182000	Weak transcription	GM12878-XiMat	blood
19	chr10:98176200-98177400	Weak transcription	HUES6 Cell Line	embryonic stem cell
20	chr10:98176200-98177600	Enhancers	iPS-18 Cell Line	embryonic stem cell
21	chr10:98176200-98177600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr10:98176400-98177600	Enhancers	HUES64 Cell Line	embryonic stem cell
23	chr10:98176400-98177600	Enhancers	Fetal Lung	lung
24	chr10:98176400-98190000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr10:98176600-98182000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr10:98176800-98177800	Enhancers	ES-I3 Cell Line	embryonic stem cell
27	chr10:98176800-98177800	Enhancers	Brain Hippocampus Middle	brain
28	chr10:98176800-98180600	Weak transcription	Ovary	ovary
29	chr10:98176800-98182000	Weak transcription	Primary monocytes fromperipheralblood	blood
30	chr10:98176800-98182200	Weak transcription	Monocytes-CD14+_RO01746	blood
31	chr10:98177000-98182000	Weak transcription	Right Atrium	heart
32	chr10:98177200-98178000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr10:98177200-98178200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

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