Variant report

Variant	rs7094130
Chromosome Location	chr10:118259401-118259402
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 57 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:54)

rs_ID	r²[population]
rs10458763	0.80[ASN][1000 genomes]
rs10749219	0.82[ASN][1000 genomes]
rs10787679	0.83[ASN][1000 genomes]
rs10787680	0.82[ASN][1000 genomes]
rs10787685	0.83[ASN][1000 genomes]
rs10885964	0.83[ASN][1000 genomes]
rs10885965	0.83[ASN][1000 genomes]
rs11197690	0.82[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs11197694	0.82[ASN][1000 genomes]
rs11197707	0.82[ASN][1000 genomes]
rs11197711	0.83[ASN][1000 genomes]
rs11197712	0.83[ASN][1000 genomes]
rs11525278	0.83[ASN][1000 genomes]
rs11525290	0.83[ASN][1000 genomes]
rs11812945	0.82[ASN][1000 genomes]
rs11813385	0.82[ASN][1000 genomes]
rs12244215	0.83[ASN][1000 genomes]
rs12244390	0.87[ASN][1000 genomes]
rs12264355	0.82[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12767361	0.83[ASN][1000 genomes]
rs17094828	0.82[ASN][1000 genomes]
rs2420293	0.83[ASN][1000 genomes]
rs2420294	0.88[ASN][1000 genomes]
rs2420295	0.83[ASN][1000 genomes]
rs2420296	0.83[ASN][1000 genomes]
rs2420297	0.83[ASN][1000 genomes]
rs2420298	0.84[ASN][1000 genomes]
rs2420299	0.83[ASN][1000 genomes]
rs2901107	0.83[ASN][1000 genomes]
rs4751597	0.83[ASN][1000 genomes]
rs4751598	0.83[ASN][1000 genomes]
rs4751599	0.83[ASN][1000 genomes]
rs4751600	0.83[ASN][1000 genomes]
rs4751601	0.83[ASN][1000 genomes]
rs4751975	0.82[ASN][1000 genomes]
rs4751982	0.83[ASN][1000 genomes]
rs58380571	0.81[ASN][1000 genomes]
rs58623886	0.80[ASN][1000 genomes]
rs58834459	0.82[ASN][1000 genomes]
rs59775092	0.80[ASN][1000 genomes]
rs6585410	0.83[ASN][1000 genomes]
rs66492245	0.80[ASN][1000 genomes]
rs68098419	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7081675	0.83[ASN][1000 genomes]
rs7097727	0.83[ASN][1000 genomes]
rs7097841	0.83[ASN][1000 genomes]
rs7098296	0.83[ASN][1000 genomes]
rs72823429	0.80[ASN][1000 genomes]
rs7894218	0.83[ASN][1000 genomes]
rs7894682	0.83[ASN][1000 genomes]
rs7910824	0.83[ASN][1000 genomes]
rs7922996	0.82[ASN][1000 genomes]
rs7923127	0.82[ASN][1000 genomes]
rs9943371	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832001	chr10:118138370-118315059	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	esv3415357	chr10:118254861-118383651	Weak transcription Active TSS Genic enhancers Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv2754784	chr10:118255010-118284010	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118258800-118262400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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