Variant report

Variant	rs7095974
Chromosome Location	chr10:21375860-21375861
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11012593	1.00[EUR][1000 genomes]
rs11012634	1.00[EUR][1000 genomes]
rs11012635	1.00[EUR][1000 genomes]
rs12241849	1.00[EUR][1000 genomes]
rs12242402	1.00[EUR][1000 genomes]
rs12244302	1.00[EUR][1000 genomes]
rs12244732	1.00[EUR][1000 genomes]
rs12247298	1.00[EUR][1000 genomes]
rs12253331	1.00[EUR][1000 genomes]
rs12261699	1.00[EUR][1000 genomes]
rs56097275	1.00[EUR][1000 genomes]
rs58153156	1.00[EUR][1000 genomes]
rs58157498	1.00[EUR][1000 genomes]
rs7077698	1.00[EUR][1000 genomes]
rs7078108	1.00[EUR][1000 genomes]
rs7087917	1.00[EUR][1000 genomes]
rs73607578	1.00[EUR][1000 genomes]
rs73607579	1.00[EUR][1000 genomes]
rs73607580	1.00[EUR][1000 genomes]
rs73607581	1.00[EUR][1000 genomes]
rs73607582	1.00[EUR][1000 genomes]
rs73609241	1.00[EUR][1000 genomes]
rs7920119	1.00[EUR][1000 genomes]
rs9665716	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530148	chr10:21065080-21724565	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
2	nsv831806	chr10:21373638-21519350	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:21359200-21378000	Weak transcription	Brain Cingulate Gyrus	brain
2	chr10:21368200-21377000	Weak transcription	Brain Angular Gyrus	brain
3	chr10:21371200-21381600	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr10:21374400-21387000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr10:21374800-21377000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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