Variant report

Variant	rs7103998
Chromosome Location	chr11:10446678-10446679
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10743141	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10770117	0.88[ASN][1000 genomes]
rs11042789	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11042793	0.87[ASN][1000 genomes]
rs12288723	0.87[ASN][1000 genomes]
rs1450274	0.88[ASN][1000 genomes]
rs3741044	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4910133	0.96[AFR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7103886	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7109187	0.86[ASN][1000 genomes]
rs763471	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9666586	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430319	chr11:10027543-10711224	Enhancers Weak transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	75 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:10445400-10446800	Enhancers	Primary neutrophils fromperipheralblood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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