Variant report

Variant	rs7105636
Chromosome Location	chr11:8626112-8626113
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:8624366..8626614-chr11:8629060..8630632,2	K562	blood:
2	chr11:8625850..8627964-chr11:8654045..8656261,2	K562	blood:
3	chr11:8625273..8626112-chr11:8816054..8816907,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000166444	Chromatin interaction

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10734635	0.95[AFR][1000 genomes]
rs10769935	0.95[AFR][1000 genomes]
rs4244802	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4244803	0.83[AFR][1000 genomes]
rs4258378	0.95[AFR][1000 genomes]
rs4310618	0.95[AFR][1000 genomes]
rs4442553	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4456256	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4929920	1.00[AMR][1000 genomes]
rs4929946	1.00[AMR][1000 genomes]
rs6484300	1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7107276	0.95[AFR][1000 genomes]
rs7119831	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7942680	0.95[AFR][1000 genomes]
rs7943945	1.00[YRI][hapmap];0.95[AFR][1000 genomes]
rs7946508	0.95[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751035	chr11:8431654-8685451	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv896983	chr11:8526643-8682465	ZNF genes & repeats Strong transcription Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:46 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:8623400-8634200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr11:8623600-8632000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr11:8625200-8626200	Enhancers	NHEK	skin
4	chr11:8625200-8626800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr11:8625200-8626800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr11:8625200-8626800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr11:8625200-8626800	Enhancers	NHDF-Ad	bronchial
8	chr11:8625200-8626800	Enhancers	NHLF	lung
9	chr11:8625200-8626800	Enhancers	Osteobl	bone
10	chr11:8625200-8627600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr11:8625200-8627800	Enhancers	HMEC	breast
12	chr11:8625200-8628000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr11:8625200-8628600	Enhancers	Muscle Satellite Cultured Cells	--
14	chr11:8625400-8627800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr11:8625400-8628400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr11:8625400-8628400	Enhancers	HSMM	muscle
17	chr11:8625600-8626200	Enhancers	Rectal Smooth Muscle	rectum
18	chr11:8625600-8626400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
19	chr11:8625600-8626400	Enhancers	Adipose Nuclei	Adipose
20	chr11:8625600-8626400	Enhancers	Duodenum Smooth Muscle	Duodenum
21	chr11:8625600-8626400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
22	chr11:8625600-8626400	Enhancers	Sigmoid Colon	Sigmoid Colon
23	chr11:8625600-8626400	Flanking Active TSS	Hela-S3	cervix
24	chr11:8625600-8626600	Enhancers	Stomach Mucosa	stomach
25	chr11:8625600-8626600	Enhancers	NH-A	brain
26	chr11:8625600-8626800	Enhancers	Esophagus	oesophagus
27	chr11:8625600-8627400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr11:8625600-8628800	Enhancers	HSMMtube	muscle
29	chr11:8625800-8626200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
30	chr11:8625800-8626200	Enhancers	Primary monocytes fromperipheralblood	blood
31	chr11:8625800-8626200	Enhancers	Colon Smooth Muscle	Colon
32	chr11:8625800-8626400	Enhancers	Duodenum Mucosa	Duodenum
33	chr11:8625800-8626400	Enhancers	Pancreas	Pancrea
34	chr11:8625800-8626400	Enhancers	Skeletal Muscle Female	skeletal muscle
35	chr11:8625800-8626400	Enhancers	Stomach Smooth Muscle	stomach
36	chr11:8625800-8626400	Enhancers	HepG2	liver
37	chr11:8625800-8626400	Enhancers	HUVEC	blood vessel
38	chr11:8625800-8626800	Flanking Active TSS	A549	lung
39	chr11:8626000-8626400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr11:8626000-8626400	Enhancers	Fetal Lung	lung
41	chr11:8626000-8626400	Enhancers	Placenta	Placenta
42	chr11:8626000-8629800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
43	chr11:8626000-8637000	Weak transcription	Fetal Intestine Small	intestine
44	chr11:8626000-8637200	Weak transcription	Monocytes-CD14+_RO01746	blood
45	chr11:8626000-8661600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
46	chr11:8626000-8661800	Weak transcription	HUES48 Cell Line	embryonic stem cell

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