The 2.0 version of rSNPBase

Variant report

Variant rs7942680
Chromosome Location chr11:8648038-8648039
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:8626000-8661600 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr11:8626000-8661800 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr11:8626200-8653000 Weak transcription Rectal Smooth Muscle rectum
4 chr11:8626600-8648800 Weak transcription Stomach Mucosa stomach
5 chr11:8626800-8659600 Weak transcription Hela-S3 cervix
6 chr11:8630600-8653000 Weak transcription Osteobl bone
7 chr11:8632800-8659000 Weak transcription Colon Smooth Muscle Colon
8 chr11:8632800-8663800 Weak transcription Fetal Kidney kidney
9 chr11:8634600-8661600 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr11:8634600-8661800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr11:8634800-8657600 Weak transcription Psoas Muscle Psoas
12 chr11:8635400-8661400 Weak transcription H9 Cell Line embryonic stem cell
13 chr11:8636200-8661400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr11:8636600-8657000 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr11:8637000-8661600 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr11:8637000-8703200 Weak transcription Small Intestine intestine
17 chr11:8637200-8648200 Strong transcription Primary monocytes fromperipheralblood blood
18 chr11:8637200-8648800 Strong transcription Primary T cells fromperipheralblood blood
19 chr11:8637400-8659200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr11:8637800-8657800 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr11:8638400-8657400 Weak transcription Placenta Amnion Placenta Amnion
22 chr11:8639600-8661000 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr11:8639800-8659800 Weak transcription K562 blood
24 chr11:8641400-8661600 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr11:8641800-8666200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr11:8642600-8650400 Weak transcription HMEC breast
27 chr11:8642600-8650600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr11:8643200-8648200 Strong transcription Fetal Adrenal Gland Adrenal Gland
29 chr11:8643200-8652600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr11:8643400-8658800 Weak transcription HSMMtube muscle
31 chr11:8643800-8659200 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr11:8644800-8663400 Weak transcription Fetal Lung lung
33 chr11:8644800-8667000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr11:8645600-8651000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr11:8645600-8652600 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr11:8645800-8655000 Weak transcription Fetal Thymus thymus
37 chr11:8646000-8648200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr11:8646000-8655000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr11:8646000-8661600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
40 chr11:8646200-8652800 Weak transcription NH-A brain
41 chr11:8646200-8653000 Weak transcription Muscle Satellite Cultured Cells --
42 chr11:8646200-8656200 Weak transcription A549 lung
43 chr11:8646200-8671000 Weak transcription HUVEC blood vessel
44 chr11:8646400-8651200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr11:8646400-8652800 Weak transcription NHDF-Ad bronchial
46 chr11:8646400-8656000 Weak transcription Fetal Muscle Leg muscle
47 chr11:8646400-8666400 Weak transcription HSMM muscle
48 chr11:8646600-8650600 Weak transcription Primary hematopoietic stem cells blood
49 chr11:8646600-8652400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr11:8646600-8652600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015