Variant report

Variant	rs7112566
Chromosome Location	chr11:32435572-32435573
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs5030190	0.94[AFR][1000 genomes]
rs5030196	0.94[AFR][1000 genomes]
rs5030216	1.00[YRI][hapmap];0.94[AFR][1000 genomes]
rs5030220	0.94[AFR][1000 genomes]
rs5030222	0.94[AFR][1000 genomes]
rs5030229	0.94[AFR][1000 genomes]
rs5030235	1.00[YRI][hapmap];0.94[AFR][1000 genomes]
rs7120241	0.94[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832108	chr11:32395937-32560583	Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv1038188	chr11:32410305-32449799	Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32433400-32437200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
2	chr11:32434000-32442400	Weak transcription	Right Ventricle	heart
3	chr11:32434200-32438000	Weak transcription	Ovary	ovary
4	chr11:32435400-32435600	Genic enhancers	Fetal Kidney	kidney
5	chr11:32435400-32437800	Weak transcription	K562	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links