Variant report

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10430935	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10734380	0.98[ASN][1000 genomes]
rs10742152	0.84[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs10767559	0.95[ASN][1000 genomes]
rs10767562	0.95[ASN][1000 genomes]
rs10835007	0.94[ASN][1000 genomes]
rs10835010	0.94[ASN][1000 genomes]
rs11029627	0.94[ASN][1000 genomes]
rs11029629	0.94[ASN][1000 genomes]
rs11029630	0.94[ASN][1000 genomes]
rs1567351	0.94[ASN][1000 genomes]
rs1580669	0.95[ASN][1000 genomes]
rs1848563	0.94[ASN][1000 genomes]
rs2298	0.98[ASN][1000 genomes]
rs4344447	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs4390308	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4494265	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4603259	0.92[ASN][1000 genomes]
rs7111936	0.99[ASN][1000 genomes]
rs7112236	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7112532	1.00[ASN][1000 genomes]
rs7928737	0.98[ASN][1000 genomes]
rs7930308	0.95[ASN][1000 genomes]
rs7931282	0.94[ASN][1000 genomes]
rs7934757	0.97[ASN][1000 genomes]
rs7936525	0.98[ASN][1000 genomes]
rs7948089	0.97[ASN][1000 genomes]
rs925237	0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044544	chr11:26506962-26967285	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
2	nsv1050121	chr11:26532655-26675303	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv540974	chr11:26532655-26675303	Weak transcription Enhancers Active TSS Strong transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv916187	chr11:26576875-27328603	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26645200-26671600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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