Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1024004	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10734541	1.00[ASN][1000 genomes]
rs10769193	1.00[ASN][1000 genomes]
rs10838571	1.00[ASN][1000 genomes]
rs2029482	1.00[ASN][1000 genomes]
rs2029483	1.00[ASN][1000 genomes]
rs2863725	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2902551	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4387328	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4756064	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61884127	0.86[EUR][1000 genomes]
rs61884129	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6485666	1.00[ASN][1000 genomes]
rs6485670	1.00[CEU][hapmap]
rs7121210	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7128233	0.84[AMR][1000 genomes]
rs7925296	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7925932	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs923531	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9734613	1.00[CEU][hapmap];0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051344	chr11:46188818-46306447	Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
2	nsv541028	chr11:46188818-46306447	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:46223000-46231400	Weak transcription	Spleen	Spleen
2	chr11:46225600-46231400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr11:46229200-46231400	Weak transcription	Hela-S3	cervix
4	chr11:46229400-46231000	Weak transcription	K562	blood

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