Variant report

Variant	rs7123634
Chromosome Location	chr11:46927532-46927533
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:46918243..46919139-chr11:46926900..46927666,2	K562	blood:
2	chr11:46925386..46927709-chr11:46935228..46936763,2	K562	blood:

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10742785	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10838631	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs4752934	1.00[EUR][1000 genomes]
rs4752935	1.00[EUR][1000 genomes]
rs4752937	1.00[EUR][1000 genomes]
rs6485688	1.00[EUR][1000 genomes]
rs6485709	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6485710	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7110643	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7930852	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7930991	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs898603	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9794941	1.00[EUR][1000 genomes]

No data

Chromatin state (count:74 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:46896600-46928200	Weak transcription	Fetal Heart	heart
2	chr11:46911200-46933800	Weak transcription	Fetal Kidney	kidney
3	chr11:46917800-46934000	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr11:46917800-46934000	Weak transcription	NHLF	lung
5	chr11:46918800-46928000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
6	chr11:46918800-46934000	Weak transcription	Colonic Mucosa	Colon
7	chr11:46919800-46927800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr11:46920400-46928400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr11:46921200-46928400	Weak transcription	Fetal Brain Female	brain
10	chr11:46921600-46928000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr11:46921600-46928000	Weak transcription	Ovary	ovary
12	chr11:46921600-46933800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr11:46921600-46933800	Weak transcription	NHEK	skin
14	chr11:46921600-46934000	Weak transcription	Rectal Smooth Muscle	rectum
15	chr11:46921600-46934200	Weak transcription	Esophagus	oesophagus
16	chr11:46921600-46936000	Weak transcription	Pancreas	Pancrea
17	chr11:46921600-46936000	Weak transcription	Sigmoid Colon	Sigmoid Colon
18	chr11:46921800-46928000	Weak transcription	HepG2	liver
19	chr11:46921800-46934000	Weak transcription	Fetal Intestine Large	intestine
20	chr11:46921800-46938400	Weak transcription	Gastric	stomach
21	chr11:46922000-46928000	Weak transcription	Placenta	Placenta
22	chr11:46922000-46928200	Weak transcription	HUES48 Cell Line	embryonic stem cell
23	chr11:46922000-46928400	Weak transcription	H9 Cell Line	embryonic stem cell
24	chr11:46922000-46928400	Weak transcription	Duodenum Smooth Muscle	Duodenum
25	chr11:46922200-46934000	Weak transcription	Duodenum Mucosa	Duodenum
26	chr11:46922200-46934000	Weak transcription	Fetal Intestine Small	intestine
27	chr11:46923000-46933800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr11:46923200-46928200	Weak transcription	Stomach Smooth Muscle	stomach
29	chr11:46923400-46928000	Weak transcription	Fetal Lung	lung
30	chr11:46924000-46929400	Enhancers	Brain Anterior Caudate	brain
31	chr11:46924200-46928000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
32	chr11:46924200-46929200	Enhancers	Brain Angular Gyrus	brain
33	chr11:46924200-46929400	Enhancers	Brain Substantia Nigra	brain
34	chr11:46924600-46930000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
35	chr11:46924800-46928000	Enhancers	Brain Hippocampus Middle	brain
36	chr11:46924800-46928800	Enhancers	Fetal Muscle Leg	muscle
37	chr11:46925200-46929000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
38	chr11:46925400-46928000	Enhancers	HUES6 Cell Line	embryonic stem cell
39	chr11:46925600-46929400	Enhancers	iPS-15b Cell Line	embryonic stem cell
40	chr11:46925800-46928000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
41	chr11:46926000-46928000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
42	chr11:46926000-46928000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr11:46926000-46928400	Weak transcription	Brain Germinal Matrix	brain
44	chr11:46926000-46928800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
45	chr11:46926000-46932000	Weak transcription	Psoas Muscle	Psoas
46	chr11:46926000-46934000	Weak transcription	Fetal Brain Male	brain
47	chr11:46926200-46928000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr11:46926200-46928000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
49	chr11:46926200-46928600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
50	chr11:46926200-46929200	Enhancers	Brain Cingulate Gyrus	brain

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