Variant report

Variant	rs7132535
Chromosome Location	chr12:121915539-121915540
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:121907482..121911795-chr12:121915012..121918527,5	MCF-7	breast:

Variant related genes	Relation type
ENSG00000089094	Chromatin interaction

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs28625063	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56840708	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs57304385	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57913468	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs58035798	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs58927387	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs59078140	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs59834647	0.88[ASN][1000 genomes]
rs60436465	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7137329	1.00[AMR][1000 genomes]
rs9788020	1.00[EUR][1000 genomes]

No data

Chromatin state (count:69 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:121905800-121923200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr12:121906000-121916600	Weak transcription	Gastric	stomach
3	chr12:121906000-121921400	Weak transcription	Thymus	Thymus
4	chr12:121906000-121927400	Weak transcription	Lung	lung
5	chr12:121906000-121927600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
6	chr12:121906000-121927600	Weak transcription	Duodenum Mucosa	Duodenum
7	chr12:121906000-121937800	Weak transcription	Aorta	Aorta
8	chr12:121906000-121938000	Weak transcription	Left Ventricle	heart
9	chr12:121906200-121919800	Weak transcription	Fetal Thymus	thymus
10	chr12:121906200-121920400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr12:121906200-121922800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr12:121906200-121927400	Weak transcription	H9 Cell Line	embryonic stem cell
13	chr12:121906200-121927600	Weak transcription	Spleen	Spleen
14	chr12:121906200-121928200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
15	chr12:121906200-121938000	Weak transcription	Rectal Mucosa Donor 29	rectum
16	chr12:121906400-121917600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr12:121906400-121917800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr12:121906400-121919000	Weak transcription	GM12878-XiMat	blood
19	chr12:121906400-121920400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr12:121906400-121921400	Weak transcription	Fetal Brain Male	brain
21	chr12:121906400-121921600	Weak transcription	Primary T cells from cord blood	blood
22	chr12:121906400-121927600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
23	chr12:121906400-121929000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
24	chr12:121906400-121933400	Weak transcription	Brain Cingulate Gyrus	brain
25	chr12:121906400-121933400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
26	chr12:121906400-121933800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
27	chr12:121906600-121921000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
28	chr12:121906600-121927400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr12:121906600-121927600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
30	chr12:121906600-121927600	Weak transcription	Primary T helper cells fromperipheralblood	blood
31	chr12:121906600-121927600	Weak transcription	Fetal Brain Female	brain
32	chr12:121906600-121928000	Weak transcription	Skeletal Muscle Female	skeletal muscle
33	chr12:121906600-121938000	Weak transcription	NHDF-Ad	bronchial
34	chr12:121908400-121927600	Weak transcription	Primary B cells from cord blood	blood
35	chr12:121908400-121928000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
36	chr12:121908600-121920600	Weak transcription	Fetal Muscle Leg	muscle
37	chr12:121908600-121927600	Weak transcription	Brain Hippocampus Middle	brain
38	chr12:121908800-121931400	Weak transcription	Fetal Lung	lung
39	chr12:121909200-121920600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
40	chr12:121909600-121919800	Weak transcription	Primary monocytes fromperipheralblood	blood
41	chr12:121909600-121920400	Weak transcription	Monocytes-CD14+_RO01746	blood
42	chr12:121909600-121927600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
43	chr12:121909800-121922000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
44	chr12:121910400-121920400	Weak transcription	Primary B cells from peripheral blood	blood
45	chr12:121910600-121928600	Weak transcription	Fetal Kidney	kidney
46	chr12:121911000-121921600	Weak transcription	HepG2	liver
47	chr12:121911000-121927600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
48	chr12:121911200-121920000	Weak transcription	Liver	Liver
49	chr12:121911400-121946400	Weak transcription	Pancreas	Pancrea
50	chr12:121912800-121917600	Weak transcription	Fetal Stomach	stomach

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