Variant report

Variant rs71353271
Chromosome Location chr18:13498548-13498549
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:13467000-13501000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr18:13467400-13502200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr18:13470800-13501800 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr18:13471000-13500400 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr18:13471000-13537400 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr18:13483800-13502600 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr18:13487000-13500800 Weak transcription Colon Smooth Muscle Colon
8 chr18:13488800-13499800 Weak transcription Psoas Muscle Psoas
9 chr18:13491200-13498800 Weak transcription HepG2 liver
10 chr18:13492000-13502000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr18:13493600-13499400 Strong transcription Stomach Smooth Muscle stomach
12 chr18:13495200-13502000 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr18:13495400-13500400 Weak transcription Aorta Aorta
14 chr18:13495800-13499800 Strong transcription Breast Myoepithelial Primary Cells Breast
15 chr18:13496400-13498600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr18:13496800-13499800 Strong transcription Primary T regulatory cells fromperipheralblood blood
17 chr18:13496800-13500200 Strong transcription Primary T cells from cord blood blood
18 chr18:13496800-13500200 Weak transcription HUVEC blood vessel
19 chr18:13497000-13498800 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr18:13497000-13499400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
21 chr18:13497000-13499600 ZNF genes & repeats Primary monocytes fromperipheralblood blood
22 chr18:13497000-13500200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr18:13497200-13499400 ZNF genes & repeats Fetal Thymus thymus
24 chr18:13497400-13499200 Strong transcription Primary T helper cells PMA-I stimulated --
25 chr18:13497600-13499800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
26 chr18:13497600-13499800 Strong transcription Rectal Mucosa Donor 29 rectum
27 chr18:13497600-13499800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
28 chr18:13497600-13500000 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
29 chr18:13497600-13500000 Strong transcription Primary T cells fromperipheralblood blood
30 chr18:13497800-13498600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr18:13497800-13498600 ZNF genes & repeats Esophagus oesophagus
32 chr18:13497800-13498800 Strong transcription Fetal Muscle Trunk muscle
33 chr18:13497800-13499000 Strong transcription Left Ventricle heart
34 chr18:13497800-13499200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
35 chr18:13497800-13499400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
36 chr18:13497800-13499400 Strong transcription Brain Anterior Caudate brain
37 chr18:13497800-13499400 Strong transcription Fetal Heart heart
38 chr18:13497800-13499400 Strong transcription Right Ventricle heart
39 chr18:13497800-13499600 ZNF genes & repeats Adipose Nuclei Adipose
40 chr18:13497800-13499600 Strong transcription Liver Liver
41 chr18:13497800-13499600 ZNF genes & repeats Gastric stomach
42 chr18:13497800-13499800 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
43 chr18:13497800-13499800 Strong transcription Primary T helper naive cells fromperipheralblood blood
44 chr18:13497800-13499800 ZNF genes & repeats Skeletal Muscle Male skeletal muscle
45 chr18:13497800-13500000 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr18:13497800-13500200 Strong transcription Rectal Smooth Muscle rectum
47 chr18:13498000-13498600 Strong transcription Skeletal Muscle Female skeletal muscle
48 chr18:13498000-13499400 ZNF genes & repeats Fetal Lung lung
49 chr18:13498000-13500000 ZNF genes & repeats Duodenum Mucosa Duodenum
50 chr18:13498000-13500000 ZNF genes & repeats Placenta Placenta

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