Variant report
Variant | rs7139009 |
---|---|
Chromosome Location | chr12:9962471-9962472 |
allele | A/G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:2 , 50 per page) page:
1
No data |
No data |
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Variant related genes | Relation type |
---|---|
ENSG00000256912 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs16907188 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs16907194 | 0.87[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs16907197 | 0.86[AFR][1000 genomes] |
rs16907219 | 0.84[AFR][1000 genomes] |
rs16907222 | 0.84[AFR][1000 genomes] |
rs16907398 | 0.89[AFR][1000 genomes] |
rs16907448 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs60502418 | 1.00[ASN][1000 genomes] |
rs7955679 | 0.89[AFR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv3377937 | chr12:9938734-9962518 | Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer | Chromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
No data |