Variant report

Variant	rs7143861
Chromosome Location	chr14:65342010-65342011
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs17102236	0.85[AFR][1000 genomes]
rs59779150	1.00[AFR][1000 genomes]
rs7144358	0.87[AFR][1000 genomes]
rs7145280	0.90[AFR][1000 genomes]
rs7158502	0.87[AFR][1000 genomes]
rs7158566	0.85[AFR][1000 genomes]
rs72625645	0.86[AFR][1000 genomes]
rs72625647	0.87[AFR][1000 genomes]
rs72625648	0.87[AFR][1000 genomes]
rs74056084	1.00[AFR][1000 genomes]
rs74056091	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3693408	chr14:65292670-65358576	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
2	nsv516238	chr14:65327288-65358576	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65331800-65342400	Enhancers	Skeletal Muscle Male	skeletal muscle
2	chr14:65335600-65344600	Weak transcription	Right Ventricle	heart
3	chr14:65339000-65342200	Enhancers	Psoas Muscle	Psoas
4	chr14:65339400-65342200	Weak transcription	Left Ventricle	heart
5	chr14:65339400-65344200	Enhancers	Skeletal Muscle Female	skeletal muscle
6	chr14:65340800-65342400	Enhancers	Fetal Heart	heart
7	chr14:65341000-65344200	Enhancers	K562	blood
8	chr14:65342000-65342400	Enhancers	Fetal Muscle Leg	muscle
9	chr14:65342000-65342400	Enhancers	Right Atrium	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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