The 2.0 version of rSNPBase

Variant report

Variant rs71479550
Chromosome Location chr11:73507465-73507466
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:73499600-73529200 Weak transcription Cortex derived primary cultured neurospheres brain
2 chr11:73499600-73549600 Weak transcription H9 Cell Line embryonic stem cell
3 chr11:73499600-73583800 Weak transcription Aorta Aorta
4 chr11:73499800-73529400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr11:73500000-73507600 Weak transcription Stomach Smooth Muscle stomach
6 chr11:73500000-73516200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr11:73500000-73518200 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr11:73500000-73519000 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr11:73500000-73520800 Weak transcription HUES64 Cell Line embryonic stem cell
10 chr11:73500000-73526800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr11:73500200-73508200 Weak transcription Primary B cells from peripheral blood blood
12 chr11:73500200-73518800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr11:73500200-73519200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr11:73500200-73526800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr11:73500200-73528200 Weak transcription Primary neutrophils fromperipheralblood blood
16 chr11:73500200-73574200 Weak transcription Right Ventricle heart
17 chr11:73500400-73508200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr11:73500400-73517600 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr11:73500400-73537000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr11:73500400-73542200 Weak transcription Rectal Smooth Muscle rectum
21 chr11:73500400-73571400 Weak transcription Fetal Brain Male brain
22 chr11:73500400-73583800 Weak transcription Colonic Mucosa Colon
23 chr11:73500600-73516600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr11:73500600-73516800 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr11:73500600-73519000 Weak transcription Primary hematopoietic stem cells blood
26 chr11:73500600-73522000 Weak transcription Muscle Satellite Cultured Cells --
27 chr11:73500600-73528000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr11:73500600-73538800 Weak transcription Colon Smooth Muscle Colon
29 chr11:73500600-73549200 Weak transcription Osteobl bone
30 chr11:73500600-73553800 Weak transcription Fetal Lung lung
31 chr11:73500800-73524200 Weak transcription A549 lung
32 chr11:73500800-73558800 Weak transcription NHEK skin
33 chr11:73503600-73511600 Weak transcription HepG2 liver
34 chr11:73503600-73532400 Weak transcription Stomach Mucosa stomach
35 chr11:73503600-73541200 Weak transcription GM12878-XiMat blood
36 chr11:73503800-73508200 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr11:73503800-73509800 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr11:73503800-73517000 Weak transcription K562 blood
39 chr11:73504000-73517000 Weak transcription Hela-S3 cervix
40 chr11:73504800-73509400 Strong transcription Fetal Stomach stomach
41 chr11:73506000-73509000 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr11:73506800-73507600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr11:73506800-73507600 Enhancers Fetal Heart heart
44 chr11:73506800-73508800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr11:73506800-73509200 Strong transcription Primary T helper cells fromperipheralblood blood
46 chr11:73507000-73507600 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
47 chr11:73507000-73507600 Flanking Active TSS Brain Substantia Nigra brain
48 chr11:73507000-73507600 Genic enhancers Spleen Spleen
49 chr11:73507000-73507800 Strong transcription Rectal Mucosa Donor 31 rectum
50 chr11:73507000-73508000 Genic enhancers Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015