The 2.0 version of rSNPBase

Variant report

Variant rs55987259
Chromosome Location chr11:73567974-73567975
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:73499600-73583800 Weak transcription Aorta Aorta
2 chr11:73500200-73574200 Weak transcription Right Ventricle heart
3 chr11:73500400-73571400 Weak transcription Fetal Brain Male brain
4 chr11:73500400-73583800 Weak transcription Colonic Mucosa Colon
5 chr11:73508400-73570600 Weak transcription Psoas Muscle Psoas
6 chr11:73508800-73573800 Weak transcription Spleen Spleen
7 chr11:73508800-73575400 Weak transcription Gastric stomach
8 chr11:73518400-73584000 Weak transcription Pancreas Pancrea
9 chr11:73533000-73580400 Weak transcription Stomach Mucosa stomach
10 chr11:73537400-73582600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr11:73539000-73577200 Weak transcription Placenta Amnion Placenta Amnion
12 chr11:73539200-73574200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr11:73539200-73583800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr11:73540000-73571200 Weak transcription NHDF-Ad bronchial
15 chr11:73540800-73577400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr11:73541800-73574000 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr11:73541800-73583600 Weak transcription Esophagus oesophagus
18 chr11:73542400-73577400 Weak transcription HUVEC blood vessel
19 chr11:73542600-73577200 Weak transcription Rectal Smooth Muscle rectum
20 chr11:73548800-73582000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr11:73549800-73583600 Weak transcription GM12878-XiMat blood
22 chr11:73550000-73574000 Weak transcription A549 lung
23 chr11:73550000-73577200 Weak transcription HSMMtube muscle
24 chr11:73550400-73574200 Weak transcription HSMM muscle
25 chr11:73550400-73577200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr11:73550400-73577200 Weak transcription NH-A brain
27 chr11:73550400-73582400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr11:73554200-73571200 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr11:73554200-73574800 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr11:73554800-73575200 Weak transcription Ovary ovary
31 chr11:73555000-73570800 Weak transcription HepG2 liver
32 chr11:73555000-73571400 Weak transcription Hela-S3 cervix
33 chr11:73555000-73577200 Weak transcription Muscle Satellite Cultured Cells --
34 chr11:73555600-73571600 Weak transcription Colon Smooth Muscle Colon
35 chr11:73555600-73573800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr11:73556000-73570800 Weak transcription Brain Germinal Matrix brain
37 chr11:73556000-73570800 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr11:73556200-73570600 Weak transcription Placenta Placenta
39 chr11:73556200-73580400 Weak transcription HUES48 Cell Line embryonic stem cell
40 chr11:73556400-73571400 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr11:73556600-73570800 Weak transcription Primary hematopoietic stem cells blood
42 chr11:73556800-73571000 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr11:73556800-73571000 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr11:73556800-73574400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr11:73556800-73575400 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr11:73557000-73577200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr11:73557600-73570800 Weak transcription Left Ventricle heart
48 chr11:73557800-73572400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr11:73557800-73573800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr11:73558000-73571200 Weak transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015