Variant report

Variant	rs12793826
Chromosome Location	chr11:73587159-73587160
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:46)
CpG islands
(count:0)
Chromatin interactive
region (count:10)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:46 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr11:73586553-73587264	K562	blood:	n/a	n/a
2	HEY1	chr11:73586761-73587189	K562	blood:	n/a	n/a
3	MXI1	chr11:73586246-73588801	SK-N-SH	brain:	n/a	n/a
4	ZNF384	chr11:73587120-73587217	GM12878	blood:	n/a	n/a
5	POLR2A	chr11:73585876-73588793	SK-N-MC	brain:	n/a	n/a
6	CHD1	chr11:73586412-73588475	H1-hESC	embryonic stem cell:	n/a	n/a
7	MYC	chr11:73586428-73588664	A549	lung:	n/a	chr11:73587946-73587954
8	POLR2A	chr11:73586022-73587172	GM12891	blood:	n/a	n/a
9	WRNIP1	chr11:73586465-73587264	GM12878	blood:	n/a	n/a
10	TEAD4	chr11:73586761-73588604	K562	blood:	n/a	n/a
11	MYC	chr11:73587035-73587169	MCF-7	breast:	n/a	n/a
12	POLR2A	chr11:73586806-73587183	K562	blood:	n/a	n/a
13	REST	chr11:73587100-73588808	H1-neurons	neurons:	n/a	n/a
14	MAX	chr11:73586890-73588492	H1-hESC	embryonic stem cell:	n/a	chr11:73587946-73587954
15	POLR2A	chr11:73586904-73587172	GM12878	blood:	n/a	n/a
16	MAX	chr11:73587095-73588399	H1-hESC	embryonic stem cell:	n/a	chr11:73587946-73587954
17	POLR2A	chr11:73585758-73588498	GM12892	blood:	n/a	n/a
18	CHD1	chr11:73587102-73588277	GM12878	blood:	n/a	n/a
19	TEAD4	chr11:73586827-73588168	HepG2	liver:	n/a	n/a
20	MYC	chr11:73586960-73588497	K562	blood:	n/a	chr11:73587946-73587954
21	SIN3A	chr11:73586766-73588511	H1-hESC	embryonic stem cell:	n/a	n/a
22	ATF2	chr11:73587066-73588326	H1-hESC	embryonic stem cell:	n/a	n/a
23	GABPA	chr11:73587099-73588663	MCF-7	breast:	n/a	chr11:73587720-73587731 chr11:73587729-73587738 chr11:73587722-73587731 chr11:73587720-73587734
24	POLR2A	chr11:73586039-73588558	HepG2	liver:	n/a	n/a
25	TEAD4	chr11:73586863-73587379	H1-hESC	embryonic stem cell:	n/a	n/a
26	POLR2A	chr11:73586645-73588995	HepG2	liver:	n/a	n/a
27	POLR2A	chr11:73586812-73587164	H1-hESC	embryonic stem cell:	n/a	n/a
28	POLR2A	chr11:73586794-73588654	Hela-S3	cervix:	n/a	n/a
29	MXI1	chr11:73586863-73588875	IMR90	lung:	n/a	n/a
30	POLR2A	chr11:73586700-73588786	H1-hESC	embryonic stem cell:	n/a	n/a
31	POLR2A	chr11:73586724-73588590	GM12892	blood:	n/a	n/a
32	POLR2A	chr11:73585923-73588429	GM12878	blood:	n/a	n/a
33	POLR2A	chr11:73586731-73588454	HepG2	liver:	n/a	n/a
34	MYC	chr11:73587041-73588468	MCF10A-Er-Src	breast:	n/a	chr11:73587946-73587954
35	POLR2A	chr11:73585928-73588368	GM12878	blood:	n/a	n/a
36	ZNF384	chr11:73587125-73588207	K562	blood:	n/a	chr11:73587942-73587950
37	HCFC1	chr11:73586850-73588832	Hela-S3	cervix:	n/a	n/a
38	POLR2A	chr11:73586144-73588619	GM12891	blood:	n/a	n/a
39	TEAD4	chr11:73586885-73587325	H1-hESC	embryonic stem cell:	n/a	n/a
40	POLR2A	chr11:73587060-73588672	MCF10A-Er-Src	breast:	n/a	n/a
41	POLR2A	chr11:73586136-73587206	GM12892	blood:	n/a	n/a
42	MAZ	chr11:73587144-73587180	HepG2	liver:	n/a	n/a
43	POLR2A	chr11:73586829-73587184	H1-hESC	embryonic stem cell:	n/a	n/a
44	POLR2A	chr11:73586283-73588352	MCF10A-Er-Src	breast:	n/a	n/a
45	CHD2	chr11:73586999-73588522	H1-hESC	embryonic stem cell:	n/a	n/a
46	MYC	chr11:73586854-73588481	MCF10A-Er-Src	breast:	n/a	chr11:73587946-73587954

No data

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:73586614..73588298-chr11:73691679..73694031,2	MCF-7	breast:
2	chr11:73497005..73500757-chr11:73586552..73589226,3	MCF-7	breast:
3	chr11:73584965..73587189-chr11:73691735..73694698,2	K562	blood:
4	chr11:73586922..73589181-chr11:73687473..73690308,2	K562	blood:
5	chr11:73470519..73472838-chr11:73586575..73589489,2	MCF-7	breast:
6	chr11:73586195..73589455-chr11:73595184..73599458,5	K562	blood:
7	chr11:73497934..73501442-chr11:73586433..73589232,4	K562	blood:
8	chr11:73561396..73563190-chr11:73586295..73588149,3	MCF-7	breast:
9	chr11:73497415..73503223-chr11:73585602..73589591,8	K562	blood:
10	chr11:73585766..73589510-chr11:73599101..73602813,5	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-UCP2-2	chr11:73586804-73587164	NONHSAT022858

No data

Variant related genes	Relation type
PAAF1	TF binding region
COA4	TF binding region
ENSG00000175582	Chromatin interaction
ENSG00000175581	Chromatin interaction
ENSG00000256681	Chromatin interaction
ENSG00000175567	Chromatin interaction
ENSG00000256034	Chromatin interaction
ENSG00000175575	Chromatin interaction

Extended variants
information (count: 189 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:184)

rs_ID	r²[population]
rs1051090	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11824294	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12262	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12786008	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12786020	0.88[CEU][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12786118	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12786752	0.88[AMR][1000 genomes]
rs12787838	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12788929	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12789142	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12790445	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12790985	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12791050	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12791140	0.82[JPT][hapmap]
rs12791467	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12791617	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12791811	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12792711	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12793053	0.84[AMR][1000 genomes]
rs12793342	0.84[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs12793550	0.84[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs12793555	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12793757	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12794180	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12794243	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12795047	0.82[EUR][1000 genomes]
rs12795932	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12798393	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12799377	0.82[JPT][hapmap]
rs12799686	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12799720	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12799745	1.00[CEU][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12799764	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12799849	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12801268	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12801553	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12801713	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12802082	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12804010	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12804029	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12804511	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12808007	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12808395	1.00[CEU][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1641	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17132419	1.00[CEU][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17244692	1.00[CEU][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17244699	0.82[YRI][hapmap]
rs17310423	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34095255	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34217459	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34243263	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34258880	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34260000	0.82[EUR][1000 genomes]
rs34289118	0.82[EUR][1000 genomes]
rs34308910	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34433535	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34475888	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34476415	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34481167	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34527298	0.92[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34550191	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34572223	0.84[AMR][1000 genomes]
rs34578576	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34590823	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34659829	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34664984	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34671213	0.82[ASN][1000 genomes]
rs34771588	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34793574	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34828254	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34840689	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34877563	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes]
rs34932908	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35020341	0.96[AMR][1000 genomes]
rs35066247	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35079634	0.84[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs35123949	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35130893	0.84[AMR][1000 genomes]
rs35208638	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35235512	0.84[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs35248853	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35277500	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35314844	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35320080	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35344902	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35349379	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35414679	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35465898	0.82[EUR][1000 genomes]
rs35481171	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35506086	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35531604	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35598792	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35640394	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35645696	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35683504	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35695385	0.82[EUR][1000 genomes]
rs35741071	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35852922	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35876082	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35937266	0.84[AMR][1000 genomes]
rs35945680	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35953544	0.82[EUR][1000 genomes]
rs35976844	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35991676	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36004107	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36011596	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36034275	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36076594	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3758930	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55677926	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55740271	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55788830	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55798481	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55850940	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55987259	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56034488	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56159953	0.92[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs56186807	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs57736748	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58199491	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58541937	0.83[EUR][1000 genomes]
rs59621909	0.82[EUR][1000 genomes]
rs60918915	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61197259	0.82[EUR][1000 genomes]
rs6592539	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6592540	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6592541	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7105778	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7110967	0.86[AMR][1000 genomes]
rs7113309	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7114235	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7114340	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7119014	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7119242	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7122091	0.88[AMR][1000 genomes]
rs7122397	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7123227	1.00[CEU][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7123766	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7124461	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7124674	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7124841	1.00[CEU][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs71464087	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71464088	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71464089	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs71464091	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71464094	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71464095	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71464096	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71464098	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71464099	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs71464100	0.84[AMR][1000 genomes]
rs71479541	0.84[AMR][1000 genomes]
rs71479550	0.84[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs71479553	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71479554	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71479555	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71479561	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71479562	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71479563	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71479564	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71479565	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7924403	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7926479	1.00[CEU][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7926863	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7929572	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7931475	0.84[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs7931833	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7932961	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7937179	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7937252	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7938019	1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs7940050	1.00[JPT][hapmap]
rs7940614	1.00[CEU][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7941476	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7944702	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7944901	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7944908	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7945614	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7945891	0.82[JPT][hapmap];0.84[AMR][1000 genomes]
rs7946245	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7948076	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7948192	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs7951088	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7951315	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530624	chr11:73114283-73646329	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
2	nsv492091	chr11:73285970-73844424	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	85 gene(s)	inside rSNPs	diseases
3	nsv530641	chr11:73358393-73638725	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
4	nsv1038105	chr11:73552023-73673836	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
5	nsv1035977	chr11:73581224-73617653	Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:73584400-73587200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr11:73584400-73587200	Weak transcription	Aorta	Aorta
3	chr11:73585000-73587200	Weak transcription	Primary neutrophils fromperipheralblood	blood
4	chr11:73585800-73587400	Enhancers	Spleen	Spleen
5	chr11:73586200-73587200	Transcr. at gene 5' and 3'	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr11:73586200-73587200	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
7	chr11:73586200-73587200	Flanking Active TSS	HSMMtube	muscle
8	chr11:73586400-73587200	Enhancers	Primary monocytes fromperipheralblood	blood
9	chr11:73586400-73587200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
10	chr11:73586400-73587200	Flanking Active TSS	Liver	Liver
11	chr11:73586400-73587200	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
12	chr11:73586400-73587200	Flanking Active TSS	Duodenum Mucosa	Duodenum
13	chr11:73586400-73587200	Enhancers	Fetal Heart	heart
14	chr11:73586400-73587200	Flanking Active TSS	HUVEC	blood vessel
15	chr11:73586400-73587600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
16	chr11:73586400-73587600	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
17	chr11:73586400-73588800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
18	chr11:73586600-73587200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr11:73586600-73587200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr11:73586600-73587200	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
21	chr11:73586600-73587200	Enhancers	Primary B cells from peripheral blood	blood
22	chr11:73586600-73587200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
23	chr11:73586600-73587200	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
24	chr11:73586600-73587200	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr11:73586600-73587200	Flanking Active TSS	Brain Angular Gyrus	brain
26	chr11:73586600-73587200	Flanking Active TSS	Brain Germinal Matrix	brain
27	chr11:73586600-73587200	Flanking Active TSS	Brain Hippocampus Middle	brain
28	chr11:73586600-73587200	Flanking Active TSS	Fetal Brain Female	brain
29	chr11:73586600-73587200	Flanking Active TSS	Fetal Stomach	stomach
30	chr11:73586600-73587200	Weak transcription	Ovary	ovary
31	chr11:73586600-73587200	Flanking Active TSS	Osteobl	bone
32	chr11:73586600-73587400	Flanking Active TSS	Primary T cells from cord blood	blood
33	chr11:73586600-73587400	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
34	chr11:73586600-73587600	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
35	chr11:73586600-73587600	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
36	chr11:73586600-73587600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
37	chr11:73586600-73587600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr11:73586600-73588600	Active TSS	Fetal Intestine Small	intestine
39	chr11:73586600-73588600	Active TSS	Fetal Muscle Trunk	muscle
40	chr11:73586600-73588800	Active TSS	HUES48 Cell Line	embryonic stem cell
41	chr11:73586600-73588800	Active TSS	iPS-15b Cell Line	embryonic stem cell
42	chr11:73586600-73588800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
43	chr11:73586600-73588800	Active TSS	A549	lung
44	chr11:73586600-73588800	Active TSS	HMEC	breast
45	chr11:73586600-73589000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
46	chr11:73586600-73589600	Active TSS	GM12878-XiMat	blood
47	chr11:73586800-73587200	Flanking Active TSS	H1 Cell Line	embryonic stem cell
48	chr11:73586800-73587200	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
49	chr11:73586800-73587200	Flanking Active TSS	Primary T cells fromperipheralblood	blood
50	chr11:73586800-73587200	Flanking Active TSS	Brain Anterior Caudate	brain

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