Variant report

Variant	rs7148483
Chromosome Location	chr14:81750224-81750225
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:81746963..81750622-chr14:81758027..81761230,3	K562	blood:
2	chr14:81686990..81688936-chr14:81749861..81752055,2	K562	blood:
3	chr14:81747629..81750450-chr14:81752253..81755595,3	MCF-7	breast:
4	chr14:81749128..81751752-chr14:81752844..81755606,2	K562	blood:

Variant related genes	Relation type
ENSG00000165417	Chromatin interaction

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11625861	0.81[CHB][hapmap]
rs17631957	0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs1885603	0.86[CHB][hapmap]
rs2081988	0.86[CHB][hapmap];0.81[ASN][1000 genomes]
rs4903978	0.86[CHB][hapmap]
rs5025110	0.86[CHB][hapmap]
rs7160569	0.86[CHB][hapmap]
rs8015423	0.90[CHB][hapmap]
rs8019108	0.91[CHB][hapmap]
rs9323698	0.91[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9323699	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9944085	0.81[CHB][hapmap]

No data

Chromatin state (count:39 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81729400-81752600	Weak transcription	Stomach Mucosa	stomach
2	chr14:81733200-81753000	Weak transcription	Hela-S3	cervix
3	chr14:81735600-81760200	Weak transcription	Primary hematopoietic stem cells	blood
4	chr14:81741800-81768400	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr14:81742600-81763400	Weak transcription	Psoas Muscle	Psoas
6	chr14:81743600-81751200	Weak transcription	Brain Anterior Caudate	brain
7	chr14:81743800-81778400	Weak transcription	Fetal Kidney	kidney
8	chr14:81744000-81755800	Weak transcription	Rectal Mucosa Donor 31	rectum
9	chr14:81744400-81758600	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr14:81744400-81759200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
11	chr14:81744800-81751000	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr14:81744800-81751200	Weak transcription	H1 Cell Line	embryonic stem cell
13	chr14:81744800-81752800	Weak transcription	HMEC	breast
14	chr14:81744800-81753800	Weak transcription	Placenta	Placenta
15	chr14:81744800-81756800	Weak transcription	K562	blood
16	chr14:81745000-81754000	Weak transcription	Fetal Intestine Small	intestine
17	chr14:81745000-81754600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
18	chr14:81745000-81755200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr14:81745000-81755200	Weak transcription	Fetal Muscle Trunk	muscle
20	chr14:81745000-81755200	Weak transcription	Fetal Muscle Leg	muscle
21	chr14:81745000-81755400	Weak transcription	H9 Cell Line	embryonic stem cell
22	chr14:81745000-81755400	Weak transcription	Spleen	Spleen
23	chr14:81745000-81769600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
24	chr14:81745200-81753200	Weak transcription	NHEK	skin
25	chr14:81745200-81755200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr14:81745200-81755400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
27	chr14:81745200-81756000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr14:81745200-81758600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
29	chr14:81745400-81751800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr14:81748600-81750400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
31	chr14:81748800-81750800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
32	chr14:81749400-81750400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
33	chr14:81749400-81750600	Weak transcription	HUES48 Cell Line	embryonic stem cell
34	chr14:81749800-81751000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
35	chr14:81749800-81754600	Weak transcription	HUES64 Cell Line	embryonic stem cell
36	chr14:81749800-81762400	Weak transcription	HSMMtube	muscle
37	chr14:81749800-81771400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
38	chr14:81750200-81750400	Enhancers	Brain Substantia Nigra	brain
39	chr14:81750200-81753800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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