Variant report

Variant	rs7148967
Chromosome Location	chr14:32592200-32592201
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:32590680..32593595-chr14:32593607..32595974,2	K562	blood:
2	chr14:32553951..32555621-chr14:32591125..32594124,2	K562	blood:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs12100931	1.00[MEX][hapmap]
rs17091619	1.00[YRI][hapmap]
rs17098508	1.00[MEX][hapmap]
rs17098520	0.82[AFR][1000 genomes]
rs7140954	1.00[MEX][hapmap]
rs7144403	0.82[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes]
rs7152059	1.00[MEX][hapmap]
rs8010167	0.82[AFR][1000 genomes]
rs8012001	1.00[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832764	chr14:32564468-32723213	Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:103 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32548000-32597400	Weak transcription	Esophagus	oesophagus
2	chr14:32552000-32596800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr14:32554600-32597200	Weak transcription	Gastric	stomach
4	chr14:32562600-32595200	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr14:32562600-32597600	Weak transcription	Stomach Smooth Muscle	stomach
6	chr14:32563000-32594000	Weak transcription	Fetal Brain Female	brain
7	chr14:32563200-32594600	Weak transcription	Fetal Muscle Leg	muscle
8	chr14:32563600-32593400	Weak transcription	Duodenum Mucosa	Duodenum
9	chr14:32564200-32594000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr14:32564200-32594400	Weak transcription	Liver	Liver
11	chr14:32565400-32597200	Weak transcription	Ovary	ovary
12	chr14:32569800-32593000	Weak transcription	Cortex derived primary cultured neurospheres	brain
13	chr14:32569800-32594200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
14	chr14:32571800-32596800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr14:32571800-32597400	Weak transcription	Spleen	Spleen
16	chr14:32571800-32606800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
17	chr14:32571800-32614400	Weak transcription	Primary T cells fromperipheralblood	blood
18	chr14:32572000-32595400	Weak transcription	Primary B cells from peripheral blood	blood
19	chr14:32574200-32593200	Weak transcription	Rectal Smooth Muscle	rectum
20	chr14:32574200-32595400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
21	chr14:32574200-32595600	Weak transcription	Primary T helper cells fromperipheralblood	blood
22	chr14:32574200-32597400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
23	chr14:32574400-32593200	Weak transcription	Sigmoid Colon	Sigmoid Colon
24	chr14:32574400-32599400	Weak transcription	Aorta	Aorta
25	chr14:32574400-32615600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
26	chr14:32576000-32594400	Weak transcription	Fetal Intestine Large	intestine
27	chr14:32576000-32599000	Weak transcription	Psoas Muscle	Psoas
28	chr14:32577200-32605400	Weak transcription	Primary T cells from cord blood	blood
29	chr14:32577400-32625000	Weak transcription	Small Intestine	intestine
30	chr14:32577800-32594400	Weak transcription	HUES48 Cell Line	embryonic stem cell
31	chr14:32577800-32594600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr14:32577800-32603200	Weak transcription	Brain Hippocampus Middle	brain
33	chr14:32577800-32603800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
34	chr14:32578000-32600000	Weak transcription	Primary T helper cells PMA-I stimulated	--
35	chr14:32578200-32593800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
36	chr14:32579600-32594400	Weak transcription	Adipose Nuclei	Adipose
37	chr14:32579800-32597200	Weak transcription	Left Ventricle	heart
38	chr14:32580000-32597400	Weak transcription	Pancreas	Pancrea
39	chr14:32580000-32597400	Weak transcription	Right Ventricle	heart
40	chr14:32580000-32598000	Weak transcription	NH-A	brain
41	chr14:32580400-32595400	Weak transcription	Brain Angular Gyrus	brain
42	chr14:32580400-32597200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
43	chr14:32580600-32595400	Weak transcription	Brain Inferior Temporal Lobe	brain
44	chr14:32580800-32593000	Weak transcription	Pancreatic Islets	Pancreatic Islet
45	chr14:32581400-32593200	Weak transcription	Right Atrium	heart
46	chr14:32583000-32597600	Weak transcription	Colon Smooth Muscle	Colon
47	chr14:32583400-32594200	Weak transcription	Fetal Kidney	kidney
48	chr14:32584000-32594600	Weak transcription	Fetal Muscle Trunk	muscle
49	chr14:32584400-32594000	Weak transcription	Fetal Heart	heart
50	chr14:32584800-32595400	Weak transcription	Fetal Stomach	stomach

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