Variant report

Variant	rs7149373
Chromosome Location	chr14:78705542-78705543
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1008306	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10483896	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12880388	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1473671	0.91[AMR][1000 genomes]
rs1967433	0.91[AMR][1000 genomes]
rs2205161	0.85[CEU][hapmap];1.00[CHB][hapmap];0.91[AMR][1000 genomes]
rs7145595	0.85[CEU][hapmap];1.00[CHB][hapmap];0.94[AMR][1000 genomes]
rs8003110	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8009291	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78694200-78706800	Weak transcription	Brain Angular Gyrus	brain
2	chr14:78699400-78714200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr14:78699800-78709000	Weak transcription	Brain Anterior Caudate	brain
4	chr14:78704800-78705800	Weak transcription	Brain Hippocampus Middle	brain
5	chr14:78705000-78707200	Enhancers	Brain Germinal Matrix	brain
6	chr14:78705200-78721600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr14:78705400-78706400	Weak transcription	Brain Inferior Temporal Lobe	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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