Variant report

Variant	rs71497233
Chromosome Location	chr10:18423082-18423083
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10764318	0.84[EUR][1000 genomes]
rs10828259	0.84[EUR][1000 genomes]
rs10828260	0.84[EUR][1000 genomes]
rs11012761	0.87[EUR][1000 genomes]
rs11012762	0.82[EUR][1000 genomes]
rs11012763	0.84[EUR][1000 genomes]
rs11591541	0.82[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs11591660	0.81[EUR][1000 genomes]
rs11592688	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12571593	0.84[EUR][1000 genomes]
rs12765240	0.84[EUR][1000 genomes]
rs12779075	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17662228	0.81[EUR][1000 genomes]
rs34418804	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs35410995	0.83[EUR][1000 genomes]
rs35769984	0.80[EUR][1000 genomes]
rs71497235	1.00[AMR][1000 genomes]
rs71497236	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv550039	chr10:18363924-18425519	Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18413200-18423400	Weak transcription	Fetal Heart	heart
2	chr10:18423000-18423400	Enhancers	iPS-20b Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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