Variant report

Variant	rs7151797
Chromosome Location	chr14:69499509-69499510
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10135127	0.84[AMR][1000 genomes]
rs10146649	0.85[AMR][1000 genomes]
rs10151376	0.84[AMR][1000 genomes]
rs11158780	0.87[AMR][1000 genomes]
rs12881049	0.85[AMR][1000 genomes]
rs12885977	0.86[AMR][1000 genomes]
rs12891103	0.86[AMR][1000 genomes]
rs1892296	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs1914004	0.81[AMR][1000 genomes]
rs1973677	0.81[AMR][1000 genomes]
rs2331918	0.87[AMR][1000 genomes]
rs35538328	0.86[AMR][1000 genomes]
rs4338726	0.87[AMR][1000 genomes]
rs4899280	0.85[AMR][1000 genomes]
rs61981619	0.91[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs761899	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8017103	0.84[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832823	chr14:69388853-69567638	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs7151797	WDR22	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69473000-69503600	Weak transcription	Right Atrium	heart
2	chr14:69486000-69503600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr14:69496600-69501000	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr14:69496600-69501200	Weak transcription	Monocytes-CD14+_RO01746	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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