Variant report

Variant	rs7152376
Chromosome Location	chr14:35853025-35853026
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:35834445..35839728-chr14:35850287..35856081,6	K562	blood:

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs12433011	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12883213	0.82[ASN][1000 genomes]
rs12883343	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1951275	0.89[ASN][1000 genomes]
rs1951276	0.90[ASN][1000 genomes]
rs1951277	0.90[ASN][1000 genomes]
rs1951278	0.90[ASN][1000 genomes]
rs2145623	0.81[ASN][1000 genomes]
rs34150541	0.80[ASN][1000 genomes]
rs34416212	0.80[ASN][1000 genomes]
rs4460979	0.89[ASN][1000 genomes]
rs58048675	0.89[ASN][1000 genomes]
rs7146555	0.90[ASN][1000 genomes]
rs7146577	0.90[ASN][1000 genomes]
rs8015219	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052392	chr14:35563220-35893309	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	83 gene(s)	inside rSNPs	diseases
2	nsv542036	chr14:35563220-35893309	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	83 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:54 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:35848600-35853200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr14:35848800-35853200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr14:35851200-35855000	Enhancers	Placenta	Placenta
4	chr14:35852200-35855400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr14:35852400-35854400	Enhancers	Rectal Smooth Muscle	rectum
6	chr14:35852400-35854600	Enhancers	Brain Inferior Temporal Lobe	brain
7	chr14:35852400-35855200	Enhancers	Psoas Muscle	Psoas
8	chr14:35852400-35855600	Enhancers	Rectal Mucosa Donor 31	rectum
9	chr14:35852400-35855800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr14:35852400-35856200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr14:35852400-35856200	Enhancers	Fetal Muscle Leg	muscle
12	chr14:35852600-35853600	Enhancers	A549	lung
13	chr14:35852600-35854600	Enhancers	Hela-S3	cervix
14	chr14:35852600-35855400	Enhancers	Fetal Intestine Small	intestine
15	chr14:35852600-35855400	Flanking Active TSS	Stomach Smooth Muscle	stomach
16	chr14:35852600-35856400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr14:35852800-35853200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr14:35852800-35853200	Enhancers	Duodenum Smooth Muscle	Duodenum
19	chr14:35852800-35853200	Bivalent Enhancer	HepG2	liver
20	chr14:35852800-35853400	Enhancers	Muscle Satellite Cultured Cells	--
21	chr14:35852800-35854000	Enhancers	HSMM	muscle
22	chr14:35852800-35855200	Enhancers	Colonic Mucosa	Colon
23	chr14:35852800-35855200	Enhancers	Sigmoid Colon	Sigmoid Colon
24	chr14:35852800-35855200	Enhancers	Stomach Mucosa	stomach
25	chr14:35852800-35855200	Enhancers	Spleen	Spleen
26	chr14:35852800-35855400	Enhancers	Fetal Intestine Large	intestine
27	chr14:35852800-35855400	Enhancers	HUVEC	blood vessel
28	chr14:35852800-35855400	Enhancers	Osteobl	bone
29	chr14:35852800-35855600	Enhancers	Fetal Muscle Trunk	muscle
30	chr14:35852800-35855600	Enhancers	Fetal Stomach	stomach
31	chr14:35852800-35855600	Enhancers	Left Ventricle	heart
32	chr14:35852800-35855600	Enhancers	NHLF	lung
33	chr14:35852800-35856200	Enhancers	Adipose Nuclei	Adipose
34	chr14:35852800-35856400	Enhancers	Fetal Heart	heart
35	chr14:35852800-35856600	Enhancers	NHDF-Ad	bronchial
36	chr14:35852800-35857200	Enhancers	Ovary	ovary
37	chr14:35852800-35857600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
38	chr14:35853000-35853200	Enhancers	K562	blood
39	chr14:35853000-35853600	Enhancers	Colon Smooth Muscle	Colon
40	chr14:35853000-35853800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr14:35853000-35853800	Enhancers	Duodenum Mucosa	Duodenum
42	chr14:35853000-35853800	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
43	chr14:35853000-35853800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
44	chr14:35853000-35854200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr14:35853000-35854800	Enhancers	Esophagus	oesophagus
46	chr14:35853000-35855200	Enhancers	Rectal Mucosa Donor 29	rectum
47	chr14:35853000-35855200	Enhancers	Right Atrium	heart
48	chr14:35853000-35855400	Enhancers	Fetal Thymus	thymus
49	chr14:35853000-35855600	Enhancers	Brain Hippocampus Middle	brain
50	chr14:35853000-35855600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain

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