Variant report

Variant	rs7152567
Chromosome Location	chr14:78535211-78535212
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10138710	0.93[ASN][1000 genomes]
rs10150673	0.93[ASN][1000 genomes]
rs177205	0.84[ASN][1000 genomes]
rs177209	0.84[ASN][1000 genomes]
rs177212	0.84[ASN][1000 genomes]
rs177213	0.84[ASN][1000 genomes]
rs177216	0.85[CHB][hapmap];0.84[ASN][1000 genomes]
rs1990793	1.00[CHB][hapmap];0.94[JPT][hapmap];0.91[ASN][1000 genomes]
rs3850370	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs3861630	0.93[ASN][1000 genomes]
rs4020124	0.91[ASN][1000 genomes]
rs4020125	0.91[ASN][1000 genomes]
rs4903697	0.93[ASN][1000 genomes]
rs4903698	0.83[ASN][1000 genomes]
rs8004771	0.86[CHB][hapmap]
rs8005420	1.00[CHB][hapmap];0.93[JPT][hapmap];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902108	chr14:78459047-78541015	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78529200-78547400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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