Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10134624	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10140719	0.96[EUR][1000 genomes]
rs10145337	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10146385	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11622986	0.86[EUR][1000 genomes]
rs1170024	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1170025	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1170028	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1170029	0.93[EUR][1000 genomes]
rs1170030	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17107343	0.86[EUR][1000 genomes]
rs17179919	0.80[EUR][1000 genomes]
rs17554993	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2150322	0.87[EUR][1000 genomes]
rs2183531	0.87[EUR][1000 genomes]
rs2415421	0.81[EUR][1000 genomes]
rs2415422	0.80[EUR][1000 genomes]
rs4597229	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs71407747	0.81[EUR][1000 genomes]
rs7148370	0.96[EUR][1000 genomes]
rs7153182	0.96[EUR][1000 genomes]
rs8013747	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8014896	0.87[EUR][1000 genomes]
rs8020796	0.87[EUR][1000 genomes]
rs954881	0.96[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916985	chr14:38052347-38838551	Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	59 gene(s)	inside rSNPs	diseases
2	nsv564387	chr14:38357864-38563111	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv901651	chr14:38419360-38556242	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:38438800-38441800	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr14:38440600-38442200	Weak transcription	Duodenum Mucosa	Duodenum
3	chr14:38440600-38442200	Weak transcription	Stomach Mucosa	stomach
4	chr14:38440600-38442600	Weak transcription	Fetal Intestine Large	intestine
5	chr14:38440600-38442600	Weak transcription	Fetal Intestine Small	intestine

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