Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11939337	0.83[EUR][1000 genomes]
rs12499745	0.83[EUR][1000 genomes]
rs13120536	0.81[EUR][1000 genomes]
rs13120734	0.81[EUR][1000 genomes]
rs13139355	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13147481	0.81[EUR][1000 genomes]
rs2322261	0.88[EUR][1000 genomes]
rs34076755	0.86[EUR][1000 genomes]
rs34116790	0.85[EUR][1000 genomes]
rs34517540	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35715844	0.83[EUR][1000 genomes]
rs36179390	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6825406	0.83[EUR][1000 genomes]
rs6826141	0.83[EUR][1000 genomes]
rs6847132	0.83[EUR][1000 genomes]
rs6847442	0.83[EUR][1000 genomes]
rs6847652	0.83[EUR][1000 genomes]
rs6847857	0.83[EUR][1000 genomes]
rs71605393	0.84[EUR][1000 genomes]
rs71605397	0.83[EUR][1000 genomes]
rs73803214	0.83[EUR][1000 genomes]
rs7655386	0.83[EUR][1000 genomes]
rs7656030	0.82[EUR][1000 genomes]
rs7656084	0.83[EUR][1000 genomes]
rs7656530	0.83[EUR][1000 genomes]
rs7666594	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529290	chr4:19658583-20173839	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv593790	chr4:19740879-20142039	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:20131600-20134000	Weak transcription	Pancreas	Pancrea

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