Variant report

Variant	rs7161315
Chromosome Location	chr14:31682917-31682918
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:31675594..31680080-chr14:31682187..31686352,8	K562	blood:

Variant related genes	Relation type
ENSG00000092148	Chromatin interaction

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10134821	0.81[EUR][1000 genomes]
rs10136065	0.85[EUR][1000 genomes]
rs10136918	0.84[EUR][1000 genomes]
rs10142413	0.97[EUR][1000 genomes]
rs10146042	0.85[EUR][1000 genomes]
rs10146272	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10147747	0.93[EUR][1000 genomes]
rs12880208	0.90[EUR][1000 genomes]
rs12888959	0.84[EUR][1000 genomes]
rs28806860	0.89[EUR][1000 genomes]
rs34807591	0.93[EUR][1000 genomes]
rs34975239	0.85[EUR][1000 genomes]
rs61978760	0.89[EUR][1000 genomes]
rs6571392	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7144107	0.80[EUR][1000 genomes]
rs7147179	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7154556	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7159848	0.84[EUR][1000 genomes]
rs8004286	0.80[EUR][1000 genomes]
rs8022272	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv901587	chr14:31501505-31752664	Strong transcription Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
2	nsv1050054	chr14:31501703-31733642	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
3	nsv1043033	chr14:31538984-31686696	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
4	esv2830427	chr14:31639110-32000034	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:31679200-31684000	Weak transcription	HepG2	liver

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