Variant report

Variant	rs7161618
Chromosome Location	chr14:84442583-84442584
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10134295	0.89[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs1015277	0.85[ASN][1000 genomes]
rs12587047	0.80[EUR][1000 genomes]
rs2210184	0.86[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs2210185	0.88[EUR][1000 genomes]
rs6574764	0.83[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs71412380	0.85[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs7154565	0.85[ASN][1000 genomes]
rs952821	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902159	chr14:84336944-84447356	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1039271	chr14:84405561-84467550	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84439600-84443000	Enhancers	Adipose Nuclei	Adipose
2	chr14:84440000-84443000	Enhancers	Rectal Smooth Muscle	rectum
3	chr14:84440000-84443000	Enhancers	Hela-S3	cervix
4	chr14:84440600-84443000	Enhancers	Colon Smooth Muscle	Colon
5	chr14:84440600-84444200	Enhancers	Fetal Heart	heart
6	chr14:84440800-84443000	Enhancers	Fetal Stomach	stomach
7	chr14:84441200-84442800	Enhancers	Duodenum Smooth Muscle	Duodenum
8	chr14:84441200-84443000	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr14:84441400-84442800	Weak transcription	Spleen	Spleen
10	chr14:84441400-84443200	Enhancers	Fetal Lung	lung
11	chr14:84441800-84442800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
12	chr14:84441800-84443000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr14:84442000-84442600	Enhancers	iPS-18 Cell Line	embryonic stem cell
14	chr14:84442000-84442800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr14:84442000-84442800	Enhancers	Stomach Smooth Muscle	stomach
16	chr14:84442000-84443000	Enhancers	HUES48 Cell Line	embryonic stem cell
17	chr14:84442000-84443000	Enhancers	Fetal Muscle Leg	muscle
18	chr14:84442000-84443000	Enhancers	Ovary	ovary
19	chr14:84442000-84443400	Enhancers	HUVEC	blood vessel
20	chr14:84442200-84442600	Enhancers	Fetal Muscle Trunk	muscle
21	chr14:84442200-84442800	Enhancers	Left Ventricle	heart
22	chr14:84442200-84442800	Enhancers	Psoas Muscle	Psoas
23	chr14:84442200-84443000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
24	chr14:84442200-84443000	Enhancers	Right Atrium	heart
25	chr14:84442200-84443000	Enhancers	Right Ventricle	heart
26	chr14:84442200-84448000	Weak transcription	Stomach Mucosa	stomach
27	chr14:84442400-84442800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
28	chr14:84442400-84443000	Enhancers	Pancreas	Pancrea

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