Variant report
Variant | rs71624243 |
---|---|
Chromosome Location | chr5:70721828-70721829 |
allele | G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
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No data |
rs_ID | r2[population] |
---|---|
rs10942466 | 0.80[ASN][1000 genomes] |
rs12110291 | 0.80[ASN][1000 genomes] |
rs12653037 | 0.84[ASN][1000 genomes] |
rs13158264 | 0.80[ASN][1000 genomes] |
rs13185743 | 0.80[ASN][1000 genomes] |
rs1423358 | 0.80[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs34029702 | 0.80[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs34117302 | 0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs4421086 | 0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs4512120 | 0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs56399551 | 0.84[ASN][1000 genomes] |
rs6881126 | 0.89[ASN][1000 genomes] |
rs7443763 | 0.80[ASN][1000 genomes] |
rs7447545 | 0.81[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs7732361 | 0.80[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs986217 | 0.80[EUR][1000 genomes];0.82[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1034703 | chr5:70391173-70995695 | Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 28 gene(s) | inside rSNPs | diseases |
2 | esv1850052 | chr5:70674583-70745387 | Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Active TSS Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
3 | nsv528571 | chr5:70679626-70767269 | Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
4 | nsv964892 | chr5:70703111-70745996 | Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:70721400-70722000 | Enhancers | Fetal Heart | heart |