Variant report

Variant	rs7167434
Chromosome Location	chr15:73612401-73612402
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:73606322..73609750-chr15:73610871..73613707,3	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs12324021	1.00[AMR][1000 genomes]
rs7178919	1.00[AMR][1000 genomes]
rs8039262	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv904343	chr15:73396760-73775043	Strong transcription Bivalent Enhancer Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
2	nsv457202	chr15:73612377-73680301	Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv569949	chr15:73612377-73680301	Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:73596800-73616800	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr15:73598200-73622800	Weak transcription	Right Atrium	heart
3	chr15:73598800-73620000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr15:73601000-73617800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr15:73601600-73615600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr15:73610000-73612600	Enhancers	H1 Cell Line	embryonic stem cell
7	chr15:73610200-73612800	Enhancers	Fetal Brain Male	brain
8	chr15:73611000-73620200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
9	chr15:73611200-73612600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr15:73611400-73622200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr15:73612000-73614200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr15:73612000-73615400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr15:73612000-73615800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr15:73612000-73617400	Weak transcription	Fetal Heart	heart
15	chr15:73612000-73618000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr15:73612000-73620200	Weak transcription	HUES64 Cell Line	embryonic stem cell
17	chr15:73612200-73613800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr15:73612200-73614800	Weak transcription	Fetal Brain Female	brain
19	chr15:73612200-73623200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
20	chr15:73612400-73616600	Weak transcription	Fetal Intestine Small	intestine
21	chr15:73612400-73618400	Weak transcription	Brain Germinal Matrix	brain
22	chr15:73612400-73620200	Weak transcription	H9 Cell Line	embryonic stem cell
23	chr15:73612400-73623000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell

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