Variant report

Variant	rs7205258
Chromosome Location	chr16:74642539-74642540
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	GATA3	chr16:74642522-74643435	MCF-7	breast:	n/a	chr16:74642953-74642962 chr16:74643003-74643011
2	MXI1	chr16:74642253-74642610	HepG2	liver:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr16:74328724..74332172-chr16:74639853..74642931,3	MCF-7	breast:
2	chr16:74641807..74643534-chr16:74646200..74648998,2	MCF-7	breast:
3	chr16:74638616..74642828-chr16:74644117..74647520,5	K562	blood:

Variant related genes	Relation type
GLG1	TF binding region
ENSG00000270945	Chromatin interaction
ENSG00000103035	Chromatin interaction
ENSG00000261404	Chromatin interaction

Extended variants
information (count: 156 )
Associated
traits (count: 5 )

rSNPs within LD-proxies of this variant (count:148)

rs_ID	r²[population]
rs1019572	0.82[CHB][hapmap];0.92[JPT][hapmap]
rs1019573	0.92[JPT][hapmap]
rs10400930	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10500587	0.88[CEU][hapmap];0.82[CHB][hapmap];0.92[JPT][hapmap]
rs11149722	0.81[CEU][hapmap];0.82[CHB][hapmap];0.85[CHD][hapmap];0.92[JPT][hapmap];0.84[MKK][hapmap]
rs1138860	0.90[ASN][1000 genomes]
rs11639812	0.88[CEU][hapmap];0.82[CHB][hapmap];0.80[CHD][hapmap];0.92[JPT][hapmap];0.86[MEX][hapmap];0.91[MKK][hapmap];0.88[TSI][hapmap]
rs11644298	0.82[CHB][hapmap];0.90[CHD][hapmap];0.92[JPT][hapmap]
rs11648868	0.85[CHD][hapmap];0.92[JPT][hapmap]
rs12325017	0.82[CHB][hapmap];0.84[CHD][hapmap];0.92[JPT][hapmap];0.91[MKK][hapmap]
rs12445991	0.82[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap]
rs12446054	0.85[CHD][hapmap];0.92[JPT][hapmap]
rs12448026	0.92[ASW][hapmap];0.81[CEU][hapmap];0.91[CHB][hapmap];0.89[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.81[MEX][hapmap];1.00[YRI][hapmap]
rs12598701	0.84[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap]
rs12921903	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12935075	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13339156	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13339161	0.96[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.91[GIH][hapmap];0.92[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap]
rs13359	0.92[CEU][hapmap];0.82[CHB][hapmap];0.85[CHD][hapmap];0.92[JPT][hapmap];0.86[MEX][hapmap];0.91[MKK][hapmap];0.88[TSI][hapmap]
rs1469140	0.81[CEU][hapmap];0.91[CHB][hapmap];0.86[CHD][hapmap];0.92[JPT][hapmap];0.82[TSI][hapmap]
rs1820262	0.92[CEU][hapmap]
rs2098754	0.92[ASW][hapmap];0.82[CHB][hapmap];0.86[CHD][hapmap];0.92[JPT][hapmap];0.92[YRI][hapmap]
rs2288053	0.85[CHD][hapmap];0.92[JPT][hapmap]
rs2303275	0.80[CHD][hapmap];0.92[JPT][hapmap]
rs2303278	0.87[CEU][hapmap];0.82[CHB][hapmap];0.92[JPT][hapmap]
rs2303281	0.91[CHB][hapmap];0.86[CHD][hapmap];0.92[JPT][hapmap];0.82[TSI][hapmap]
rs28377859	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28502731	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3785312	0.88[CEU][hapmap];0.92[JPT][hapmap]
rs3826239	0.92[JPT][hapmap];0.89[MKK][hapmap];0.82[TSI][hapmap]
rs3851729	0.85[JPT][hapmap];0.85[MKK][hapmap]
rs4072222	0.92[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs4072450	0.92[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.91[YRI][hapmap];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4243108	0.84[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];0.85[CHD][hapmap];0.94[GIH][hapmap];0.92[JPT][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.91[YRI][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4271617	0.89[ASN][1000 genomes]
rs4286131	0.89[ASN][1000 genomes]
rs4287593	0.89[ASN][1000 genomes]
rs4302071	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4316784	0.88[ASN][1000 genomes]
rs4344772	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4438331	0.82[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs4462623	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4544266	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs4548905	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4564599	0.93[ASN][1000 genomes]
rs4588013	0.81[EUR][1000 genomes]
rs4600490	1.00[CHB][hapmap];0.89[CHD][hapmap];0.92[JPT][hapmap]
rs4887772	0.96[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.91[GIH][hapmap];0.92[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap]
rs4887776	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];0.93[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4887777	1.00[ASW][hapmap];0.96[CEU][hapmap];0.92[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.95[MEX][hapmap];0.97[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4887779	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4888238	0.81[CEU][hapmap];0.82[CHB][hapmap];0.85[CHD][hapmap];0.92[JPT][hapmap]
rs4888240	0.80[CHD][hapmap];0.85[JPT][hapmap]
rs4888242	0.82[CHB][hapmap];0.92[JPT][hapmap]
rs4888253	0.96[CEU][hapmap];1.00[CHB][hapmap];0.89[CHD][hapmap];0.97[GIH][hapmap];0.92[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap]
rs4888256	0.92[ASW][hapmap];0.81[CEU][hapmap];0.91[CHB][hapmap];0.90[CHD][hapmap];0.82[GIH][hapmap];0.92[JPT][hapmap];1.00[YRI][hapmap]
rs4888257	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4888258	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4888259	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4888260	0.82[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs4888262	0.85[JPT][hapmap]
rs4888266	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4888267	0.81[JPT][hapmap]
rs4888270	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4888274	0.85[JPT][hapmap]
rs57488599	0.81[ASN][1000 genomes]
rs58136167	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6564117	0.88[CEU][hapmap];0.92[CHB][hapmap];0.80[CHD][hapmap];0.92[JPT][hapmap];0.86[MEX][hapmap];0.88[TSI][hapmap]
rs6564141	0.80[ASN][1000 genomes]
rs6564142	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6564145	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6564146	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6564147	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6564148	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6564149	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6564152	0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs6564153	0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs6564154	0.84[ASW][hapmap];0.91[CHB][hapmap];0.85[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.91[YRI][hapmap];0.89[ASN][1000 genomes]
rs6564155	0.86[ASN][1000 genomes]
rs6564157	0.82[CHB][hapmap];0.81[JPT][hapmap]
rs6564159	0.85[JPT][hapmap]
rs71392603	0.80[ASN][1000 genomes]
rs7184754	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7185026	0.92[ASW][hapmap];0.81[CEU][hapmap];0.91[CHB][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];0.92[JPT][hapmap];1.00[YRI][hapmap];0.81[ASN][1000 genomes]
rs7185722	0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs7189123	0.88[CEU][hapmap];1.00[CHB][hapmap];0.84[CHD][hapmap];0.91[GIH][hapmap];0.92[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap]
rs7190631	0.84[ASN][1000 genomes]
rs7191665	0.85[JPT][hapmap]
rs7191754	0.81[ASN][1000 genomes]
rs7193423	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7193508	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7193583	0.96[CEU][hapmap];0.91[YRI][hapmap];0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7193959	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7194143	0.82[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs7194687	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7195135	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7195499	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7196369	0.85[JPT][hapmap]
rs7196627	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7201105	0.82[EUR][1000 genomes]
rs7203452	0.92[ASW][hapmap];0.81[CEU][hapmap];0.91[CHB][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];0.92[JPT][hapmap];1.00[YRI][hapmap]
rs7204382	0.84[ASW][hapmap];0.90[CHB][hapmap];0.80[CHD][hapmap];0.85[GIH][hapmap];0.90[MEX][hapmap];0.83[YRI][hapmap]
rs7204804	0.84[ASW][hapmap];0.80[CEU][hapmap];0.91[CHB][hapmap];0.85[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.91[YRI][hapmap];0.83[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs7342732	0.84[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];0.85[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.93[TSI][hapmap];0.91[YRI][hapmap];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7978	0.85[JPT][hapmap]
rs8045848	0.82[CHB][hapmap];0.95[CHD][hapmap];0.92[JPT][hapmap];0.81[ASN][1000 genomes]
rs8047243	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8047523	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs8048133	0.84[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs8048239	0.80[ASN][1000 genomes]
rs8048596	0.90[ASN][1000 genomes]
rs8049056	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs8050615	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8050624	0.84[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.86[TSI][hapmap];0.91[YRI][hapmap];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8050850	0.81[ASN][1000 genomes]
rs8052923	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8053084	0.93[ASN][1000 genomes]
rs8054836	0.81[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs8055784	0.84[ASW][hapmap];0.91[CHB][hapmap];0.85[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.91[YRI][hapmap];0.83[ASN][1000 genomes]
rs8055803	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8056718	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8057279	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8058034	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8058133	0.85[JPT][hapmap]
rs8058437	0.94[ASN][1000 genomes]
rs8058692	0.92[ASW][hapmap];0.81[CEU][hapmap];0.91[CHB][hapmap];0.89[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.80[ASN][1000 genomes]
rs8058922	0.84[ASW][hapmap];0.91[CHB][hapmap];0.85[CHD][hapmap];0.85[GIH][hapmap];0.92[JPT][hapmap];0.90[MEX][hapmap];0.91[YRI][hapmap];0.85[ASN][1000 genomes]
rs8059869	0.85[JPT][hapmap]
rs8061156	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs8061338	0.81[AMR][1000 genomes]
rs8062404	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8062959	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs918782	0.85[ASW][hapmap];0.81[CEU][hapmap];0.91[CHB][hapmap];0.86[CHD][hapmap];0.92[JPT][hapmap];0.92[YRI][hapmap]
rs9888976	0.91[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap]
rs9921672	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9923145	0.85[JPT][hapmap]
rs9923616	1.00[CHB][hapmap];0.92[JPT][hapmap]
rs9923644	0.80[ASN][1000 genomes]
rs9924716	0.84[ASN][1000 genomes]
rs9925807	0.81[ASN][1000 genomes]
rs9927073	1.00[ASW][hapmap];0.84[CEU][hapmap];0.91[CHB][hapmap];0.95[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9928181	0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9929483	0.84[ASW][hapmap];0.91[CHB][hapmap];0.85[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.91[YRI][hapmap];0.81[ASN][1000 genomes]
rs9930003	0.81[ASN][1000 genomes]
rs9931225	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs9932831	0.81[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs9938833	0.84[ASW][hapmap];0.80[CEU][hapmap];0.91[CHB][hapmap];0.85[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.91[YRI][hapmap];0.87[ASN][1000 genomes]
rs9939178	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916687	chr16:74241238-74896721	Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
2	nsv949374	chr16:74466960-75172358	Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
3	nsv1060629	chr16:74483574-74660669	Weak transcription Enhancers Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
4	nsv1062517	chr16:74483574-74710623	Enhancers Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
5	nsv833279	chr16:74490746-74663073	Active TSS Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
6	nsv1061095	chr16:74519718-75407020	Strong transcription Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	123 gene(s)	inside rSNPs	diseases
7	nsv906905	chr16:74527618-74679244	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
8	nsv974837	chr16:74642496-74646718	Enhancers Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

mRNA abundance (count:5)

SNP	Gene	Cis/trans	Tissue	Source
rs7205258	RFWD3	cis	Skin Sun Exposed Lower leg	GTEx
rs7205258	MLKL	Cis_1M	lymphoblastoid	RTeQTL
rs7205258	RFWD3	cis	Thyroid	GTEx
rs7205258	RFWD3	cis	Esophagus Mucosa	GTEx
rs7205258	RFWD3	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:104 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:74641200-74643000	Weak transcription	Small Intestine	intestine
2	chr16:74641200-74653800	Weak transcription	Spleen	Spleen
3	chr16:74641400-74642800	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr16:74641400-74655800	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr16:74641400-74656000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr16:74641600-74642600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr16:74641600-74643000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
8	chr16:74641600-74643000	Enhancers	Placenta	Placenta
9	chr16:74641600-74643200	Enhancers	Pancreas	Pancrea
10	chr16:74641600-74643400	Enhancers	Fetal Thymus	thymus
11	chr16:74641600-74643800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
12	chr16:74641600-74644200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
13	chr16:74641600-74644200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
14	chr16:74641600-74644600	Enhancers	Primary T cells fromperipheralblood	blood
15	chr16:74641600-74644600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
16	chr16:74641600-74644800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
17	chr16:74641600-74651000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr16:74641600-74656000	Weak transcription	Aorta	Aorta
19	chr16:74641600-74657000	Weak transcription	Gastric	stomach
20	chr16:74641600-74657800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr16:74641800-74642600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
22	chr16:74641800-74642600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr16:74641800-74642800	Enhancers	Primary T killer memory cells from peripheral blood	blood
24	chr16:74641800-74643600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
25	chr16:74641800-74643800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
26	chr16:74641800-74644000	Enhancers	Primary T helper cells fromperipheralblood	blood
27	chr16:74641800-74644600	Enhancers	Primary T helper naive cells from peripheral blood	blood
28	chr16:74641800-74644800	Enhancers	Primary T cells from cord blood	blood
29	chr16:74641800-74653600	Weak transcription	GM12878-XiMat	blood
30	chr16:74641800-74654600	Weak transcription	Primary B cells from peripheral blood	blood
31	chr16:74641800-74655200	Weak transcription	Primary B cells from cord blood	blood
32	chr16:74641800-74655400	Weak transcription	Duodenum Smooth Muscle	Duodenum
33	chr16:74641800-74655400	Weak transcription	Rectal Mucosa Donor 31	rectum
34	chr16:74641800-74655800	Weak transcription	NHEK	skin
35	chr16:74641800-74656200	Weak transcription	HUVEC	blood vessel
36	chr16:74641800-74656600	Weak transcription	Brain Cingulate Gyrus	brain
37	chr16:74642000-74642600	Enhancers	HepG2	liver
38	chr16:74642000-74642800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
39	chr16:74642000-74642800	Enhancers	Primary T helper cells PMA-I stimulated	--
40	chr16:74642000-74642800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
41	chr16:74642000-74643000	Enhancers	Hela-S3	cervix
42	chr16:74642000-74643000	Enhancers	K562	blood
43	chr16:74642000-74643200	Enhancers	Primary hematopoietic stem cells	blood
44	chr16:74642000-74643600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
45	chr16:74642000-74643800	Enhancers	Dnd41	blood
46	chr16:74642000-74645600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr16:74642000-74647800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
48	chr16:74642000-74651000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
49	chr16:74642000-74652200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
50	chr16:74642000-74653200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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